| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4704 |
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| Symbol | |
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| ID | 8017282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | + |
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| Start bp | 39751 |
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| End bp | 41367 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644828396 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_002979596 |
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| Protein GI | 241589571 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.101516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGA CAGATACGTT CGACTTCATC GTCGTCGGCG CGGGTTCCGC CGGCGCGGCG
GCTGCGGTGC GCCTGGCACA AGCAGCAAAG CACCGGGTCC TGCTGCTGGA GGCAGGACCG
CCCGACACTA GCTTCTGGTC GCGCATCCCG ATCGGCGTCG GCACCTTGCT TGCCAAGGGC
ATCTATATTC GCGACTTCTT TACCGAGCCA GACCCGCAAC TCAACAGCCG CCGAATCTAC
TGGCCGCGCG GTTGGGTGGT GGGAGGCTGT TCCACCGTCA ACGGCATGAT GTGGGTGCAC
GGCACGCCGC GCGAATATGA CCTGTGGGCC CAGGATGGCT GCCCCGGCTG GGGCTGGGCC
GACCTGGCAC ATTGGTTCCG CAAGATCGAG AACTATGCCA AGGGTGATCC GATGTATCGT
GGACTGAACG GACCCGTTGG CGTCACGGAG TTCCAGCCGG TGGACGAAGG CCCCGACGCA
TTCCTCGACG CCTTGCAGGC ATCCGGCGTG GGCAAGCGGG TCAGGGACTA CAACGCCGGC
GGGATCGGCG GCAGCTACGT TCAATTCAAT ACACGCCGGG GATTGCGCTC TAGCATGCGC
GAGGCTTATC TCGATCCCAA CAAGGGCCTG CCCAATCTGA CGATCATGAC GGGCGTGTTG
GCCACGCGTG TGCTGACGCA GGGCAAACAT GCCTGCGGCA TCGTGGCGCG GGCCGAGGGG
CGTGAGCTGA CGCTGCATGC GCGCAAGGAG GTGATCCTGT GCGGCGGTAC CTTCAATTCT
GCGCAGCTAC TGGAGCTGTC GGGCATCGGC CGGCGTGAAG TGCTGGATGC GGCAGGGATT
CCGCTGTTGC ACGAGCTACC TATGGTTGGC GAAAACCTCT CCGAACACGT CTACAGTCCG
ATCACGTTCC GGTGCAAGCC GGGCATCAGT TGGAACCGGA GGTTGAACAG CCCGATCGGG
AAACTGCTGG ATGGGGCGCG CTGGCTGCTC CGCCGTGACG GCCGATTGAC CTCGGCGACC
ATGACTGCGC ATGGATTCGT GCCGCACAAC CCCGCCGACA ACAATGCACA GATCAAACTG
CAGCTCCAGC AAGCCAGTGC GCCAGGCAAT CGCGGCAAGT CGATGACACG CCTGGACTCA
TTCGATGGCG TGACACTTGC GTCATTCCAA ATCAGCCCCT ATTCGCGCGG GTCGTGCCAC
ATTGCCAATG CCGACCCGGC CGCCGCGCCA AAGCTGATAT CTAACCATTT CACCGATCCG
CGGGATATCG AAACCAGCCT GGTGGCGCTG CGCAAGCTGC GCCAAGTTGC CTCTGCTGCC
CCACTGGCCC GTTGGCTGCT CGAAGAGCTG CGCCCCGGTC GTCGCGCAAT GTCGGATGAG
GCACTGATCG AGTACATGCG GGCGACCAGC GCTACGGCCT ACCACCCAGT CGGTACCTGC
AGGATGGGGG CTGACACCTC ACAATCAGTG GTTGATCCGT GGCTGCGCGT ACACGGGGTC
AGCGGGCTGC GTGTCGCGGA TTGCAGCATC ATGCCCTCCA TCGCGTCCAC CAACACGAAT
GCGCTTGCCA TCGTTATCGG CGAGCGCGTG GCCGAATTCG CATTGGCCGA CGCCTGA
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| Protein sequence | MNETDTFDFI VVGAGSAGAA AAVRLAQAAK HRVLLLEAGP PDTSFWSRIP IGVGTLLAKG
IYIRDFFTEP DPQLNSRRIY WPRGWVVGGC STVNGMMWVH GTPREYDLWA QDGCPGWGWA
DLAHWFRKIE NYAKGDPMYR GLNGPVGVTE FQPVDEGPDA FLDALQASGV GKRVRDYNAG
GIGGSYVQFN TRRGLRSSMR EAYLDPNKGL PNLTIMTGVL ATRVLTQGKH ACGIVARAEG
RELTLHARKE VILCGGTFNS AQLLELSGIG RREVLDAAGI PLLHELPMVG ENLSEHVYSP
ITFRCKPGIS WNRRLNSPIG KLLDGARWLL RRDGRLTSAT MTAHGFVPHN PADNNAQIKL
QLQQASAPGN RGKSMTRLDS FDGVTLASFQ ISPYSRGSCH IANADPAAAP KLISNHFTDP
RDIETSLVAL RKLRQVASAA PLARWLLEEL RPGRRAMSDE ALIEYMRATS ATAYHPVGTC
RMGADTSQSV VDPWLRVHGV SGLRVADCSI MPSIASTNTN ALAIVIGERV AEFALADA
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