Gene Rpic12D_4699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4699 
Symbol 
ID8017277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp32248 
End bp33585 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content51% 
IMG OID644828391 
Productamine oxidase 
Protein accessionYP_002979591 
Protein GI241589566 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1231] Monoamine oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0922876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.472473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT GCGTGCAGAG TGAGAATGCT GCGGAGACAA CCACGTCGTC AATCAAGAAA 
ATCTCCAGCA GCAGTACAAC CACAAGATCG GTCATCGTTA TTGGCGCCGG CATTGCTGGG
TTGTCAGCCG CTAGTCAATT GGCGCAGCAA GGCTACGCCG TTACGGTGCT GGAGTCCCAA
TCCAAAGTGG GAGGACGGCT AAGCACGGAC AGAAGCCTGG GGATTCCCTT TGATCAGGGA
GCCAGTTGGA TTCACAGACC CAACGGCAAC CCTATCACTC CGCTTGCAGC GCAAGCTGGT
GCCACTACCT TCCTCACTGA TGACCACAAT GTCGTCGTCC ATGATGTCAA TGGTGCAGCC
TACCCTGACG CTACGCTGAC CAGCACCGAA CATACTTACA ATACCGTTCG AGACAGCATT
CCTGGTTTGG GCAGCCTGAA TCAAAGTTTT GCGGCGGTCT TCAATAGTAA TTATCCCCAA
TACCAGAATG ACCGGCTATG GAAATACATG CTCTCCGCCT ACCTTGAGTT TGATGTAGGC
GGAGATGTCT CCAAAATATC ATCCCTATAT TTTGAAGATG ATCGGCAATT CAGCGGCGAT
GATGTCATTG TTACCAATGG CTATGACACC GTGGCCAACT ATTTGGCGAA AGGCTTGAAC
TTGATCTTGA ACACCCAGGT TGCAATCATT GATTACTCAG GAGATCAAGT GACTGTAGCG
ACAACTGGTG GCCAGATCTA TCAAGCCGAC TCCGTTGTTG TTACTGTGCC ATTGGGGGTT
CTCAAGAGCA ACGCCATCAC GTTTATACCG GCCTTGCCTA GCGAGAAGGC CGCCGCCATT
GCCAATATGG GTATGGGAAA TATCAATAAA TTCTTGCTAA CCTGGAACGC GCCATTCTGG
GATACAAGCT TGCAGTATAT TGGCTACACT CCCGACAGCC TTGGGCAATT TAACTACTAC
CTCAATATCA ACAAGTATCT CGCATCAGCG AACGCCTTGA TGACATTCGC TTTTGGCGAC
TATGCCACCG CCACGGAAGC CATGACGGAC AGCGAGGTCA TTAACGCGAT TATGGCCAAT
CTCCAGACCA TCTACGGAAG CTCCATCCCT TTCCCGACGA ACATGCTGCG CACAGCTTGG
GGAAAGAACG TGAATTCCTT CGGCGCCTAC TCCTACGCGG CAAGCGGCAC CACCTCAGCT
GACTTTGATA CCTTGGCTGA GGCGATCAAC AACAAGGTGT TTTTCGCTGG AGAACATACC
AACCGAGATT ATCGGGGGAC TGTCCATGGG GCTTATTTGA GTGGTACCCG CGAAGTCGCG
AAGATCATGG CGCTGTAA
 
Protein sequence
MTACVQSENA AETTTSSIKK ISSSSTTTRS VIVIGAGIAG LSAASQLAQQ GYAVTVLESQ 
SKVGGRLSTD RSLGIPFDQG ASWIHRPNGN PITPLAAQAG ATTFLTDDHN VVVHDVNGAA
YPDATLTSTE HTYNTVRDSI PGLGSLNQSF AAVFNSNYPQ YQNDRLWKYM LSAYLEFDVG
GDVSKISSLY FEDDRQFSGD DVIVTNGYDT VANYLAKGLN LILNTQVAII DYSGDQVTVA
TTGGQIYQAD SVVVTVPLGV LKSNAITFIP ALPSEKAAAI ANMGMGNINK FLLTWNAPFW
DTSLQYIGYT PDSLGQFNYY LNINKYLASA NALMTFAFGD YATATEAMTD SEVINAIMAN
LQTIYGSSIP FPTNMLRTAW GKNVNSFGAY SYAASGTTSA DFDTLAEAIN NKVFFAGEHT
NRDYRGTVHG AYLSGTREVA KIMAL