Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4699 |
Symbol | |
ID | 8017277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | - |
Start bp | 32248 |
End bp | 33585 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644828391 |
Product | amine oxidase |
Protein accession | YP_002979591 |
Protein GI | 241589566 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1231] Monoamine oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0922876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.472473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTT GCGTGCAGAG TGAGAATGCT GCGGAGACAA CCACGTCGTC AATCAAGAAA ATCTCCAGCA GCAGTACAAC CACAAGATCG GTCATCGTTA TTGGCGCCGG CATTGCTGGG TTGTCAGCCG CTAGTCAATT GGCGCAGCAA GGCTACGCCG TTACGGTGCT GGAGTCCCAA TCCAAAGTGG GAGGACGGCT AAGCACGGAC AGAAGCCTGG GGATTCCCTT TGATCAGGGA GCCAGTTGGA TTCACAGACC CAACGGCAAC CCTATCACTC CGCTTGCAGC GCAAGCTGGT GCCACTACCT TCCTCACTGA TGACCACAAT GTCGTCGTCC ATGATGTCAA TGGTGCAGCC TACCCTGACG CTACGCTGAC CAGCACCGAA CATACTTACA ATACCGTTCG AGACAGCATT CCTGGTTTGG GCAGCCTGAA TCAAAGTTTT GCGGCGGTCT TCAATAGTAA TTATCCCCAA TACCAGAATG ACCGGCTATG GAAATACATG CTCTCCGCCT ACCTTGAGTT TGATGTAGGC GGAGATGTCT CCAAAATATC ATCCCTATAT TTTGAAGATG ATCGGCAATT CAGCGGCGAT GATGTCATTG TTACCAATGG CTATGACACC GTGGCCAACT ATTTGGCGAA AGGCTTGAAC TTGATCTTGA ACACCCAGGT TGCAATCATT GATTACTCAG GAGATCAAGT GACTGTAGCG ACAACTGGTG GCCAGATCTA TCAAGCCGAC TCCGTTGTTG TTACTGTGCC ATTGGGGGTT CTCAAGAGCA ACGCCATCAC GTTTATACCG GCCTTGCCTA GCGAGAAGGC CGCCGCCATT GCCAATATGG GTATGGGAAA TATCAATAAA TTCTTGCTAA CCTGGAACGC GCCATTCTGG GATACAAGCT TGCAGTATAT TGGCTACACT CCCGACAGCC TTGGGCAATT TAACTACTAC CTCAATATCA ACAAGTATCT CGCATCAGCG AACGCCTTGA TGACATTCGC TTTTGGCGAC TATGCCACCG CCACGGAAGC CATGACGGAC AGCGAGGTCA TTAACGCGAT TATGGCCAAT CTCCAGACCA TCTACGGAAG CTCCATCCCT TTCCCGACGA ACATGCTGCG CACAGCTTGG GGAAAGAACG TGAATTCCTT CGGCGCCTAC TCCTACGCGG CAAGCGGCAC CACCTCAGCT GACTTTGATA CCTTGGCTGA GGCGATCAAC AACAAGGTGT TTTTCGCTGG AGAACATACC AACCGAGATT ATCGGGGGAC TGTCCATGGG GCTTATTTGA GTGGTACCCG CGAAGTCGCG AAGATCATGG CGCTGTAA
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Protein sequence | MTACVQSENA AETTTSSIKK ISSSSTTTRS VIVIGAGIAG LSAASQLAQQ GYAVTVLESQ SKVGGRLSTD RSLGIPFDQG ASWIHRPNGN PITPLAAQAG ATTFLTDDHN VVVHDVNGAA YPDATLTSTE HTYNTVRDSI PGLGSLNQSF AAVFNSNYPQ YQNDRLWKYM LSAYLEFDVG GDVSKISSLY FEDDRQFSGD DVIVTNGYDT VANYLAKGLN LILNTQVAII DYSGDQVTVA TTGGQIYQAD SVVVTVPLGV LKSNAITFIP ALPSEKAAAI ANMGMGNINK FLLTWNAPFW DTSLQYIGYT PDSLGQFNYY LNINKYLASA NALMTFAFGD YATATEAMTD SEVINAIMAN LQTIYGSSIP FPTNMLRTAW GKNVNSFGAY SYAASGTTSA DFDTLAEAIN NKVFFAGEHT NRDYRGTVHG AYLSGTREVA KIMAL
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