Gene Rpic12D_4695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4695 
Symbol 
ID8017273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp26383 
End bp27294 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID644828387 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002979587 
Protein GI241589562 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC GTTCTCTAGC CGCCATGGCG GTAACCATGT TGATCGCCGC GGCATCGGCG 
ACCACCTTTG TCGCGCCGCA AATGGCGTAC GCCCAAGTGA GTGACGCGAA GGTGCCCGCC
CAGAGCACCA TCGCGCCGCA AACGGCTGGC GCGACAGCCG ACCAGGCGGT GCCGCCGCCA
GTCCCTGCCA GCACCGAAAC CGTGACTAAC CCGTACGGCC TCAGTGCGCT GTGGAACAAC
GGCGACTTTG TTGCTCGCTT CGTGCTGATG CTGCTGGTGA TCATGTCGAT GGGAAGCTGG
TACATCATGG TTACCAAGTT CCTGGAGCAA ATGCGTGCAA ACCGCCGTGC GAAGAACGCC
GACGATCAAC TGTGGAGCGC GCCGTCGCTT GCCGCGGGCG CCAAGCTGCT GGACGAGGCC
TCGCTGTTCC GCTTCCTTGC CGAAACCGCG GTCGAAGCGG GTGAGCATCA TGACGAAGCC
TTGCTCGAAT CGGTTGATCG CAACACCTGG ATCGACGTCT CGGTTGAGCG CGCGATCACG
AACGTGTCGA ACCGCCTGCA AGATGGCCTC GCGTTCCTCG CCACGGTTGG CTCAACGGCG
CCGTTCATCG GCCTGTTCGG CACGGTATGG GGCATCTATC ACGCGCTGAC GGCAATCGGC
ATCGCCGGCC AGGCGTCGAT CGACAAGGTC GCGGGCCCGG TGGGTGAAGC GCTGATCATG
ACGGCAATCG GTCTCGCAGT CGCGGTTCCG GCTGTGCTCG GCTACAACTT CCTCGTACGC
CGCAACAAGT CGGTGATGGA ACGTGTGCGT GCCTTTGGTG CCCAACTGCA CGCCGTCGTG
TTGGCCGGCG GCCAGCGTGC CAAGCGTCCG GTGGTAGTTC AAAAGGCTGC ACTGGACGAG
CAAGTGGGGT AA
 
Protein sequence
MKKRSLAAMA VTMLIAAASA TTFVAPQMAY AQVSDAKVPA QSTIAPQTAG ATADQAVPPP 
VPASTETVTN PYGLSALWNN GDFVARFVLM LLVIMSMGSW YIMVTKFLEQ MRANRRAKNA
DDQLWSAPSL AAGAKLLDEA SLFRFLAETA VEAGEHHDEA LLESVDRNTW IDVSVERAIT
NVSNRLQDGL AFLATVGSTA PFIGLFGTVW GIYHALTAIG IAGQASIDKV AGPVGEALIM
TAIGLAVAVP AVLGYNFLVR RNKSVMERVR AFGAQLHAVV LAGGQRAKRP VVVQKAALDE
QVG