Gene Rpic12D_4693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4693 
Symbol 
ID8017271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp25515 
End bp25943 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content60% 
IMG OID644828385 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002979585 
Protein GI241589560 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATGA ACGTAGGATC CAGCGGGATT GGCCGAGAAC CGGAAGTGAT GGCCGACATC 
AACACCACGC CATTGATCGA CGTGATGCTG GTACTGCTGA TCATGCTGAT CATCACGATT
CCGATGCAGA CGCACGTGAT CAACATGAAC CTGCCGGTCG GCAACCCACC GCCTCCAGTT
ATCCAGCCCG AAGTCGTGCA GGTCGATATC GCCTCCGACG GTACGATCTT GTGGAACGGC
ACGGTAGTGA ACCAGGCCGC GCTCGACGCC AAGCTCTCGC AGGTGGCGGC GGCGCCGGTG
CAGGCCGAAA TTCGTCTGCT GCCGAACAAG CTTGCGCCGT ATCGGAGTGT CGCAGCAGTG
CTTGCTTCCG CGCAGCGCAT GGGTGCTACG AAGATTGGCC TGATCGGCGA CGAGCGGTTC
ATGCAATAG
 
Protein sequence
MGMNVGSSGI GREPEVMADI NTTPLIDVML VLLIMLIITI PMQTHVINMN LPVGNPPPPV 
IQPEVVQVDI ASDGTILWNG TVVNQAALDA KLSQVAAAPV QAEIRLLPNK LAPYRSVAAV
LASAQRMGAT KIGLIGDERF MQ