Gene Rpic12D_4690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4690 
Symbol 
ID8017268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp21919 
End bp22623 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID644828382 
ProductPropanoyl-CoA C-acyltransferase 
Protein accessionYP_002979582 
Protein GI241589557 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAT CCGTGATCGT TGCCAGCGCC GGCATGATTC CTTTCATCAA ACCGGGGGCA 
AGCGAGCCCT ATCCGGTGAT GGCCGCCAAG GCCATCAGGG CCGCGCTGGC CAACGCGGGT
CTCGAATACA GCAAGGTGCA GCAGGCCTAT GCTGGCTATG TCTACGGCGA CTCCACCGCC
GGCCAGCGCG GGCATTATGA GGTTGGCATG ACCGGTATCC CGGTAGTGAA CGTCAACAAC
AACTGCTCGA CCGGTTCGAC CGCGCTCTAC CTGGCGCGTC AGGCCGTTGC CGGCGGCGCG
GTGGATTGCG CACTGGCCTT CGGCTTCGAA CAGATGATGC CGGGGGCACT GGGCTCGGTC
TTCAGCGATC GGCCCAGCCC CTTCGAACGC TTTGACGCGG TGACCGCCGA ATTGATCGAC
GTTCCGGATG TGCCATTCGC GCTACGCTAC TTTGGCGGCG CGGGGCTCGC ACACATGCAG
GAGTTCGGCA CGAAGCTCGA GACGTTTGCC AAGATCCGCG CCAAGGCCAG CCGTCATGCG
GCCAACAATC CGCTGGCGCT GTTCCGCACG GTGGTGACGG AGGAAGACGT CATGGCCTCG
CCCATGATCT GGCCCGGTGT GATGACCCGG CTCATGGCCT GCCCCCCCGA CTTGCGGCGC
TGCTGCGGCG CTGCTGGTCT CGGAAGCATT TGCGAAAAAG CATGA
 
Protein sequence
MTSSVIVASA GMIPFIKPGA SEPYPVMAAK AIRAALANAG LEYSKVQQAY AGYVYGDSTA 
GQRGHYEVGM TGIPVVNVNN NCSTGSTALY LARQAVAGGA VDCALAFGFE QMMPGALGSV
FSDRPSPFER FDAVTAELID VPDVPFALRY FGGAGLAHMQ EFGTKLETFA KIRAKASRHA
ANNPLALFRT VVTEEDVMAS PMIWPGVMTR LMACPPDLRR CCGAAGLGSI CEKA