| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4688 |
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| Symbol | |
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| ID | 8017266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | - |
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| Start bp | 18435 |
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| End bp | 19961 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644828380 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_002979580 |
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| Protein GI | 241589555 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGACG TGGCCATACT GAGCATCATT CGACGCTGGC ATCTTCGCGA CCAGATCCCG
CTGCGCGAGA TCGCCAGACG CCTGGGCATC TCCAGGAACA CGGTCAGGCG CTATCTGCGC
GCTGACACCA CGGCACCGGC CTATCCTGCA CGGCAGAGTC CGAGCAAGCT CGACGGCCAT
GCCGCCAAGC TCTCCGCTTG GCTCAAGACC GAGGCCAACA AGCCACGCAA GCAACGGCGC
ACACTCAAGC AGATCCACAC TGATCTGTGT GCCTTGGGCT TCACCGGCTC CTACGATCGC
GTTGCCGCAT TCGCTCGCCG CTGGCGCCAG GAGCAACAGG AGCAAGCCCG CACGTCGGGG
CGAGGCACCT TTATCCCACT GCGCTTCGCA GAGGGTGAGG CCTTCCAGTT CGACTGGAGC
GAGGACTGGG CGGTCATCGC CGGCGAGCGC ACCAAGCTGC AAGTGGCTCA GTTCAAGCTC
AGCCACAGCC GCGCATTCTT CCTGCGCGCG TATCTGCTGC AGACCCACGA GATGCTGTTC
GATGCCCATC ACCACGCCTT TGTGGCCTGG GGCGGTATCC CGCGTCGCGG CATCTACGAC
AACATGAAGA CCGCCGTGGA TCGCGTGCGC CTGGGCAAGT TGCGTGACGT CAACTTGCGC
TTCAGCACCA TGGTCAGCCA CTACCTGTTC GACGCCGAGT TCTGTAACCC GGCCTCGGGC
TGGGAGAAGG GGCAGATAGA GAAGAACGTG CAGGACAGCC GTCACCGCAT CTGGCAACGC
ATCCCTGCAT TCGGCTCTCT GGCGGCACTT AATGACTGGC TGGCCGACCA GTGCGTACGG
CTGTGGCAGC AGACCCGCCA TCCTGAGCTG GACATGACCC TCTGGGAGGC CTGGTCGCTG
GAGCGGCCAC ACCTGATGCC CGTGGGGCAG CCGTTCGATG GCTTTGTGGA GCACACCAAG
CGCGTCTCAC CAACCTGCCT GGTGACCTTC GAGCGCAACC GCTACAGCGT ACCGGCGTCG
TTTGCCAACC GGCCCATCAG TCTGCGCGTC TATGCCAATC GGCTCGTGTT CGTGGCCGAA
GGCCAGGTGA TTGCCGAGCA CGTGCGGCAC ATCGACCGTA GCCATCTTCC GGGGCGCACA
ATCTATGACT GGCACCACTA CCTCGCGGTG CTGCAGCGTA AGCCCGGTGC GCTGCGTAAC
GGCGCACCGT TCGCCGAACT GCCAGAGGGC TTCCGACGCC TGCAATCCAC ACTGCTCAAA
CGCCCTGGTG GCGATCGCGA GATGGTCGAG ATCCTGGCGC TGGTGCTGTT GCACGACGAA
CAGGCCGTGC TCACTGCGGT GGAGCTCGCA CTGGAGGCGG GTGCCCCGTC CAAGCAAACC
ATCCTGAACA TCCTCAGCCG CCTCCTGGAA GGCGAGCCCG TGGCACCGAT CACCTCACCA
CAGGCACTGG CGCTGCACGT CGAACCGCAG GCCAACGTCG GCCGCTACGA CAGCTTGCGA
GATCGGGAGG TGCATCATGC AGCATGA
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| Protein sequence | MIDVAILSII RRWHLRDQIP LREIARRLGI SRNTVRRYLR ADTTAPAYPA RQSPSKLDGH
AAKLSAWLKT EANKPRKQRR TLKQIHTDLC ALGFTGSYDR VAAFARRWRQ EQQEQARTSG
RGTFIPLRFA EGEAFQFDWS EDWAVIAGER TKLQVAQFKL SHSRAFFLRA YLLQTHEMLF
DAHHHAFVAW GGIPRRGIYD NMKTAVDRVR LGKLRDVNLR FSTMVSHYLF DAEFCNPASG
WEKGQIEKNV QDSRHRIWQR IPAFGSLAAL NDWLADQCVR LWQQTRHPEL DMTLWEAWSL
ERPHLMPVGQ PFDGFVEHTK RVSPTCLVTF ERNRYSVPAS FANRPISLRV YANRLVFVAE
GQVIAEHVRH IDRSHLPGRT IYDWHHYLAV LQRKPGALRN GAPFAELPEG FRRLQSTLLK
RPGGDREMVE ILALVLLHDE QAVLTAVELA LEAGAPSKQT ILNILSRLLE GEPVAPITSP
QALALHVEPQ ANVGRYDSLR DREVHHAA
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