| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4687 |
|---|
| Symbol | |
|---|
| ID | 8017265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012855 |
|---|
| Strand | - |
|---|
| Start bp | 17660 |
|---|
| End bp | 18445 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644828379 |
|---|
| Product | IstB domain protein ATP-binding protein |
|---|
| Protein accession | YP_002979579 |
|---|
| Protein GI | 241589554 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1484] DNA replication protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.212682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCATG AAGTCATGTT GGAGATGCTC AAGTCGTTGA AGCTGCACGG CATGGCACAA
GCGCTGGGCG ACCTGGCGGC GCAGGACTCG CCGGCCTACC AGTCGGCCGT GGCCATCCTG
TCGCGTCTGC TCAAGGCCGA GCTCACCGAG CGCGAGGTGC GCTCGCTGGC CTATCAGATG
AAGGTGGCGC GCTTCCCAGC CTACCGAGAC CTGACCGGCT TCGACTTCAG TTGCAGCGAG
GCCAACGAAG CACTGGTGCG GCAGCTTCAC CGCTGCGAGT TCCTCGAGTC GGCGCACAAC
ATCGTGCTGG TCGGCGGCCC AGGTACGGGC AAGACCCATC TCGGCACCGC CATCGGCGTG
CAGGCCGTGG AGCACCATCA CCGTCGAGTG CGCTTCTTCT CGACCGTGGA GCTCGTCAAC
GCGTTGGAAC TGGAGAAGGT CTCAGGCAAG CCGGGACACC TGGCCACGCG ACTCATGTAT
GCCGACCTGG TGATCCTCGA TGAGCTGGGC TATCTGCCGT TCAGCCAGAC CGGCGGCGCA
TTGCTGTTCC ACCTGATCAG CAAGCTCTAC GAGCGCACCA GCCTCGTCAT CACCACCAAC
CTGAGCTTCG GCGAATGGTC CAGCGTCTTC GGGGACGCCA AGATGACCAC CGCGCTATTG
GATCGCCTCA CGCACCACTG CCACATTGTT GAAACCGGCA ACGATAGCTA TCGTTTCAAG
CACAGCACCA CCCAGCCCAA GAAGGAGAAA CGCACCGCCA AACAACCCGC ACAAAGCGAC
ACCTAA
|
|---|
| Protein sequence | MQHEVMLEML KSLKLHGMAQ ALGDLAAQDS PAYQSAVAIL SRLLKAELTE REVRSLAYQM
KVARFPAYRD LTGFDFSCSE ANEALVRQLH RCEFLESAHN IVLVGGPGTG KTHLGTAIGV
QAVEHHHRRV RFFSTVELVN ALELEKVSGK PGHLATRLMY ADLVILDELG YLPFSQTGGA
LLFHLISKLY ERTSLVITTN LSFGEWSSVF GDAKMTTALL DRLTHHCHIV ETGNDSYRFK
HSTTQPKKEK RTAKQPAQSD T
|
|---|
| |