Gene Rpic12D_4671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4671 
Symbol 
ID8017250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp4010 
End bp4486 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content53% 
IMG OID644828364 
Productsingle-strand binding protein 
Protein accessionYP_002979564 
Protein GI241589539 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.726649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CGAACCATTG TGTTCTCCAC GGCAGGTTGG GGAAGGACCC TGAAGTTCGT 
TTTCGCAACT CTGGCGGTGC CAGTGTGTTG TTCTCGCTCT GTACGAACGA TGACTATCAC
AACGGAACCG AGTGGGTGGA AGTCAAGGAG TGGCACGACT GTGTGGTAGT TGGTAGCGCC
GCTGAGCAGT ATGCTGAGAA GTATCAGCAG GGCGACGAAG TCATCGTGCA AGGCCGTATC
AAACCTCGTA TCTATGAGAA GAACGGTCAG AAGGTGAAAG TTGTCGAAAT CTATGTGTCC
ACGATGGAGT TGATCGCCAA GCGCGCGAAG CCGACCGGAA ACGATCAGCA GCGAGGAGGC
GCTTCAGAAG GGCGCAAGGC CGAACAGCGA AAGCAATATC ACGCTGGAAA CGGTAGGCAG
GAGGCAACTC CTGTTGTTGG GTCGTCGGAC GACGATTATG GTGGCAAGAA CTTTTGA
 
Protein sequence
MKNTNHCVLH GRLGKDPEVR FRNSGGASVL FSLCTNDDYH NGTEWVEVKE WHDCVVVGSA 
AEQYAEKYQQ GDEVIVQGRI KPRIYEKNGQ KVKVVEIYVS TMELIAKRAK PTGNDQQRGG
ASEGRKAEQR KQYHAGNGRQ EATPVVGSSD DDYGGKNF