Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6571 |
Symbol | |
ID | 8017092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | - |
Start bp | 288555 |
End bp | 290456 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644828356 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_002979556 |
Protein GI | 241554343 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCGG TAGCCGCATT CGTCTTATGT TTTGTGCTGT TTTCGCTGCC GGCGAGCGCC GAGCAACGCC CGGGCCTCCA TGCGCTCCTG GTGGGCGTTG GGACCTATCA AAATTCAAAT GGTGGCTCTT TTCGCAATCT GAGGGGTCCA GCCAACGACG TCCCGGCACT CGAGAGCGTT CTGCGTGATC GCTACGGTCT GATGCCGGCG AACACAGAGA CACTCATCGA TCAGGCAGCA AAGCGTCAAG CGGTGGTCGA TGGGCTGCAG AAGCTGTTGT CCGATGCAGC AATAGGCGAT GTCGTCCTTT TTTACTTCTC AGGTCACGGC TCGCGCCAGT TCGACAAATC GATGGACGAA ACCTCCCAGC TTGACGACAC GATCTTGCCC TACGACGCAA GGGACAAGGA TGGGAAGATC CCCGACATAA TAGATGACGA GTTGAGTTCC TTCGTTGCAA AAGCCCTAGA CCGCGGGCTG AAACCTGTGG TCATCCTGGA TAGTTGCCAT TCCGGCACCG GGACAAGGCT CTGGGCGCAG GCACGGACCG TCCCAGCGCT GAACGAACCA GCAGCGGGTT GGTCGTCAAA CAAGAGTCAA GCATCACAGC ACAACATCTT TACCGGCGAC AGCATCCTGC TCGCCGCGGC TCAGGACGAT GAGGAAGCTC TGGAATCCGA CCGTGATGGC GTGGTGCGCG GCGAATTCAG CAGAGCCCTC GTTCGGGTGC TGGAAACAGC GGAGGAAGAT GTTACCTATC TCGATGTGCT TACCAGGGTA AGGGTTACAC TGAACAGCCA GGGGGTGCCC CACAATCCGC AGGGCGAAGG CGGCCTGTCG CAGAAATTTC TCGGTGCGGG ACCTCTCGGA AAGCTACCGG TTCGTGCCGA GCCTGAGGGC GCACAGCGCG TGAAACTTTT TGCAGGCGCA GTGTCCGGCG TAACGCAAGG CTCGCAGTTT GCCTTGTTTA CCACTGCGGC TGAGGCCGGC CGCGGCTTTC CTGTTCTCAC CGACGGCGTC GTGACGGCCG TCCATCCAGC GTCGGCTGAA ATCGATTTGA AAAAGGATGT TATCTTGCCG GCAAGGCTTT TTGCAATGGA GCAGGCGCAT TCATTTGGCG ATTTGCGGCT AAGGGTGGCA TTGTCTGGAG GAGACGAGGT GAAACGCGGG CAGGTCAAGG ACGTCATCGA AAAGCTCAGC TTCGTTGAGA TCGTTCCTGA CCGTGATGCA ACACAGTGGT TGGATGTTTC AGATAAAGGC GTTCGACTCA AACGTCTGGA CGGTTCTGCA GTCGGCCCTG TCCGCCCCTT GTCGGCGTTC ACCGAGGGTC AAGGCGCACT GCTTTTAGGT CGATTGGCCC GCTACCAGGC GCTTCTTTCT CTCTCTAACC CAGAAAACCC CAACGCACCG GTCAGGGCAA GAGTACTCTT GGCCACAAAG GGATCCGACA AAGTCAGCAA TCCGAAGATG CAGGACGGCG AAGCGGTCAT CAAGCCGCGC CAGAGCTTTG TGCTGGGTTT GTACAATGGG AGTGTTTCGC CCAAACACGC CTACGTTCTT AATCTCGACG CGGACTACTG CGTCAGGCTG CTAATGCCGC CGCCATCGGG ATCGGACGAA CCGCTTCTGG GTTCGGTCAG AACGAAGCTT CTGAGAGCAC CAGACAGAGC CGGCCGCGAA TATTTCCTGA TAATTTCCAC CGATCGACCC ATCGCTCCCG AGGCGTTGGA ACAGGATTGT CTGACGGACG AGACCCTTCG CCAAGGGTTG GCGACGAAAC TCGGCGATCC GCTCGCACAG CTGCTTGCCA ATGCCGCTTC CACGCAGCGC GGCCCGACGC CGGAACTTTC CGTCAAGGGA TGGTCGACCA GCTTTGTTTC GCTTGTCGTT CGGGAAGACT GA
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Protein sequence | MRPVAAFVLC FVLFSLPASA EQRPGLHALL VGVGTYQNSN GGSFRNLRGP ANDVPALESV LRDRYGLMPA NTETLIDQAA KRQAVVDGLQ KLLSDAAIGD VVLFYFSGHG SRQFDKSMDE TSQLDDTILP YDARDKDGKI PDIIDDELSS FVAKALDRGL KPVVILDSCH SGTGTRLWAQ ARTVPALNEP AAGWSSNKSQ ASQHNIFTGD SILLAAAQDD EEALESDRDG VVRGEFSRAL VRVLETAEED VTYLDVLTRV RVTLNSQGVP HNPQGEGGLS QKFLGAGPLG KLPVRAEPEG AQRVKLFAGA VSGVTQGSQF ALFTTAAEAG RGFPVLTDGV VTAVHPASAE IDLKKDVILP ARLFAMEQAH SFGDLRLRVA LSGGDEVKRG QVKDVIEKLS FVEIVPDRDA TQWLDVSDKG VRLKRLDGSA VGPVRPLSAF TEGQGALLLG RLARYQALLS LSNPENPNAP VRARVLLATK GSDKVSNPKM QDGEAVIKPR QSFVLGLYNG SVSPKHAYVL NLDADYCVRL LMPPPSGSDE PLLGSVRTKL LRAPDRAGRE YFLIISTDRP IAPEALEQDC LTDETLRQGL ATKLGDPLAQ LLANAASTQR GPTPELSVKG WSTSFVSLVV RED
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