Gene Rleg_6571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6571 
Symbol 
ID8017092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp288555 
End bp290456 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content58% 
IMG OID644828356 
Productpeptidase C14 caspase catalytic subunit p20 
Protein accessionYP_002979556 
Protein GI241554343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCGG TAGCCGCATT CGTCTTATGT TTTGTGCTGT TTTCGCTGCC GGCGAGCGCC 
GAGCAACGCC CGGGCCTCCA TGCGCTCCTG GTGGGCGTTG GGACCTATCA AAATTCAAAT
GGTGGCTCTT TTCGCAATCT GAGGGGTCCA GCCAACGACG TCCCGGCACT CGAGAGCGTT
CTGCGTGATC GCTACGGTCT GATGCCGGCG AACACAGAGA CACTCATCGA TCAGGCAGCA
AAGCGTCAAG CGGTGGTCGA TGGGCTGCAG AAGCTGTTGT CCGATGCAGC AATAGGCGAT
GTCGTCCTTT TTTACTTCTC AGGTCACGGC TCGCGCCAGT TCGACAAATC GATGGACGAA
ACCTCCCAGC TTGACGACAC GATCTTGCCC TACGACGCAA GGGACAAGGA TGGGAAGATC
CCCGACATAA TAGATGACGA GTTGAGTTCC TTCGTTGCAA AAGCCCTAGA CCGCGGGCTG
AAACCTGTGG TCATCCTGGA TAGTTGCCAT TCCGGCACCG GGACAAGGCT CTGGGCGCAG
GCACGGACCG TCCCAGCGCT GAACGAACCA GCAGCGGGTT GGTCGTCAAA CAAGAGTCAA
GCATCACAGC ACAACATCTT TACCGGCGAC AGCATCCTGC TCGCCGCGGC TCAGGACGAT
GAGGAAGCTC TGGAATCCGA CCGTGATGGC GTGGTGCGCG GCGAATTCAG CAGAGCCCTC
GTTCGGGTGC TGGAAACAGC GGAGGAAGAT GTTACCTATC TCGATGTGCT TACCAGGGTA
AGGGTTACAC TGAACAGCCA GGGGGTGCCC CACAATCCGC AGGGCGAAGG CGGCCTGTCG
CAGAAATTTC TCGGTGCGGG ACCTCTCGGA AAGCTACCGG TTCGTGCCGA GCCTGAGGGC
GCACAGCGCG TGAAACTTTT TGCAGGCGCA GTGTCCGGCG TAACGCAAGG CTCGCAGTTT
GCCTTGTTTA CCACTGCGGC TGAGGCCGGC CGCGGCTTTC CTGTTCTCAC CGACGGCGTC
GTGACGGCCG TCCATCCAGC GTCGGCTGAA ATCGATTTGA AAAAGGATGT TATCTTGCCG
GCAAGGCTTT TTGCAATGGA GCAGGCGCAT TCATTTGGCG ATTTGCGGCT AAGGGTGGCA
TTGTCTGGAG GAGACGAGGT GAAACGCGGG CAGGTCAAGG ACGTCATCGA AAAGCTCAGC
TTCGTTGAGA TCGTTCCTGA CCGTGATGCA ACACAGTGGT TGGATGTTTC AGATAAAGGC
GTTCGACTCA AACGTCTGGA CGGTTCTGCA GTCGGCCCTG TCCGCCCCTT GTCGGCGTTC
ACCGAGGGTC AAGGCGCACT GCTTTTAGGT CGATTGGCCC GCTACCAGGC GCTTCTTTCT
CTCTCTAACC CAGAAAACCC CAACGCACCG GTCAGGGCAA GAGTACTCTT GGCCACAAAG
GGATCCGACA AAGTCAGCAA TCCGAAGATG CAGGACGGCG AAGCGGTCAT CAAGCCGCGC
CAGAGCTTTG TGCTGGGTTT GTACAATGGG AGTGTTTCGC CCAAACACGC CTACGTTCTT
AATCTCGACG CGGACTACTG CGTCAGGCTG CTAATGCCGC CGCCATCGGG ATCGGACGAA
CCGCTTCTGG GTTCGGTCAG AACGAAGCTT CTGAGAGCAC CAGACAGAGC CGGCCGCGAA
TATTTCCTGA TAATTTCCAC CGATCGACCC ATCGCTCCCG AGGCGTTGGA ACAGGATTGT
CTGACGGACG AGACCCTTCG CCAAGGGTTG GCGACGAAAC TCGGCGATCC GCTCGCACAG
CTGCTTGCCA ATGCCGCTTC CACGCAGCGC GGCCCGACGC CGGAACTTTC CGTCAAGGGA
TGGTCGACCA GCTTTGTTTC GCTTGTCGTT CGGGAAGACT GA
 
Protein sequence
MRPVAAFVLC FVLFSLPASA EQRPGLHALL VGVGTYQNSN GGSFRNLRGP ANDVPALESV 
LRDRYGLMPA NTETLIDQAA KRQAVVDGLQ KLLSDAAIGD VVLFYFSGHG SRQFDKSMDE
TSQLDDTILP YDARDKDGKI PDIIDDELSS FVAKALDRGL KPVVILDSCH SGTGTRLWAQ
ARTVPALNEP AAGWSSNKSQ ASQHNIFTGD SILLAAAQDD EEALESDRDG VVRGEFSRAL
VRVLETAEED VTYLDVLTRV RVTLNSQGVP HNPQGEGGLS QKFLGAGPLG KLPVRAEPEG
AQRVKLFAGA VSGVTQGSQF ALFTTAAEAG RGFPVLTDGV VTAVHPASAE IDLKKDVILP
ARLFAMEQAH SFGDLRLRVA LSGGDEVKRG QVKDVIEKLS FVEIVPDRDA TQWLDVSDKG
VRLKRLDGSA VGPVRPLSAF TEGQGALLLG RLARYQALLS LSNPENPNAP VRARVLLATK
GSDKVSNPKM QDGEAVIKPR QSFVLGLYNG SVSPKHAYVL NLDADYCVRL LMPPPSGSDE
PLLGSVRTKL LRAPDRAGRE YFLIISTDRP IAPEALEQDC LTDETLRQGL ATKLGDPLAQ
LLANAASTQR GPTPELSVKG WSTSFVSLVV RED