| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6557 |
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| Symbol | |
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| ID | 8017105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012854 |
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| Strand | - |
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| Start bp | 272541 |
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| End bp | 275828 |
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| Gene Length | 3288 bp |
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| Protein Length | 1095 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644828343 |
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| Product | Ti-type conjugative transfer relaxase TraA |
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| Protein accession | YP_002979543 |
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| Protein GI | 241554330 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02768] Ti-type conjugative transfer relaxase TraA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCT ATCATCTCAG CATGAAGCCG ATCGCTCGCA GCGGTGGCCG CAGCGCTGTC
GCGTCCGCCG CCTATCGTGC GGCCGAGCGG CTGACGAACG AGCGTGATGG GCTAACCCAT
GATTTTAGCA ACAGGACAGG TGTCGAGCAT GCCGAGATCG TCTTGCCGGC TGGGTCTTCC
GCCTATTGGG CGATGAAGCG ATCGGCCTTG TGGAATGCCG CCGAGCGTGC CGAGAAACGC
AGTGACGCCC GGATTGCCCG GGAATTCGAA ATCGCCCTGC CGCACGAACT GACGCCGGAT
CAACGCCTGG TGCTGACGCG GGCCTTTGCC GAAGATCTCG CCAATCGTTA TGGCGCTGCC
GTCGACTTCG CGATCCATCG GCCAGGTGAG GGAAGTGACA TCAGAAACAG CCATGCGCAT
CTGATGATGA CGACGCGTGA GGTGAGGGAA ACCGGCCTTG GCGACAAGAC GCTGCTCGAG
CGGGAAAACA GATGGCTTCT CGCCAATCAC CTGCCGCCAT CGCAACTGCA GCTGAAGGAT
CTCAGACAGG CGTGGGAGCA TCTTGCCAAC GAGCACCTTG AGAGGGCCGG CCACGATATC
CGCATCGATC ATCGCTCGCA TCTGGAAGCC GGGATCACGA TCGAGCCGAG CGAACATGTC
GGTGTGCATG CCACTCAGAT CGATCGCCAG GGTGGGGCAG TCTCGCGCGT GCGCATCTCA
CCGCAATCGG CCGATCGCAA TGCCGAGATC GTTCGCCGGC GGCCCGAAGA GATCTTGAAG
CTGATTACCA ACGAGAAGAG CGTCTTCAGC CGCTATGACA TTGCCAGGGC TCTGCATCGC
ACCATCAATG ACGATCCGCA GACCTTCCAG AACGCCTTTG CATCGGTCAT GGCGTCGAAG
GCCCTCGTCG AGCTGAGGCC CGACAGTTCG AGTGTTCGCG GCCGCGATGG AGAGGCACGC
TATTCGACGG TCGAGATGGT GGCGATCGAG GGTGCGATGG CAACAGCCAC TGTTGCGATG
AAGGCGCGCC AAAACCACGG TGTGGCGAAG CGCTATGTCG ATGCGGCCAT CGCCGATCAG
GACAGATCGA TCCAGGCGGG AAATCCTTCA CCCGGGCAGG GACTATCGGC GGAACAGCGT
CAGGCGATCG AGCATGTCAC CGGCGCCTCG CAGATCGCCG TGGTGATCGG CTTTGCCGGT
GCCGGCAAGA GCACGATGCT GGCAGCTGCC CGGCACGCCT GGGAAGCGCA AGGTTATCGC
GTTCATGGCG CGGCATTGGC CGGCAAGGCC GCGGAAGGCC TGGAGCAATC GTCCGGGATC
TCAAGTCGCA CCTTGGCGTC CTGGGAATAC AGCTGGCAGG CTGATCGTGG TCGGCTCAAT
GCTCGTGACG TGTTCGTCAT CGACGAGGGC GGCATGGTCG GAAGTCGTCA GCTTGCCCGC
TTCGTCGACG AGGTCAAACG GGCCGGCGCC AAGCTCGTCC TGGTCGGAGA TCATGAACAG
CTTCAGGCGA TCGGAGCGGG CGCGCCGTTT CGGGCGATCG CGGAAGCCGT CGGCCATGCG
CAGCTTTCGG AAGTGCGCCG GCAAAAAGCC GATTGGCAAA AGCAGGCTTC GATCGACTTT
GCCTCGCATC GGACCGCAGC CGGGTTGTCG GCCTACGAGG CACGGGGAAG CGTTCATCTG
AAGACGGATC GCGCGGAAAC GCTGAAGGTG ATCATTGCCG ATTACGTCGC TGACCGATCG
GCCAATCCCA ACGACACGCG CATTGCCATG GCCCATCGAC GCGACGACGT CCGTGCCATC
AATGCCGGCA TTCGCGCTCG GTTGCAGGAG CGCGGTGAGC TCTCAAGAAG CACCGGCACC
TCGGATGATC GTGGTGAGGA ACTCACCTAC CAGACCAACA ATGGGAAGCG ATCCTTCGCA
CGCGGCGATC GCATCGTCTT CCTGGAGAAC GATCGTGATC TCGCCGTCAA GAATGGCATG
TTGGGCGAGG TGATCGCCGT CGCGCCGGAC GCAATACAAG TTCGGCTTGA CGGCAAGGCG
CAGACGCAAG ATGGGCAACG CCAGGTGACC GTACCGGTCA ATCGTTACCA ATCCTTTGAT
CACGGCTACG CAACGACGAT CCACAAGACG CAAGGCGCTA CCGTCGACCG GAGTTTTGTC
CTGGCGTCGA CGACGATGGA CCGGCATCTG ACCTACGTGG CGATGACCCG TCATCGCGAG
GAGGTGCAGC TCTATGCCAG CCTCGATGCG TTCAAGACTG TGCGATCCCT GACAGAGACA
CTGAGCCGCT CAGGCGTCAA GGAGACGACG CTCGACTATA CCCATGACTT TGCCAATCGG
CGCGGCATGA ACGACCGCCG GGGGCAGGGC GAGAGTGAGG TCGCATCTCA GGGAATCAGC
AAAGGGATAC AGCCCATCCC GGACACGGCG GTTCCCAAGC CAATGCAAGA ACCGCGGCCG
CTCGCAGCGC GCACCATCGC CGATGGCGGC TCTTCGCACC AGGATCCCAA TGTCGATGAA
CGTGACGATG AACGCCGCGT GCTCGTTGCG GCCGTGAAGA CTTATGCGAT GAGTGTCGAA
GCGGTTGGAC GGGCAAAGGC GATGCCGGCA TTCGAACGAG ATTGGGCCGC GGCAAAGCAG
CTTGCGCCGC AGGTGTTCAA GGACGCGCCA GCGGCCATGG ACGTGTTGCG TGGCCGGATC
CTGGATGAGA ATGCAGATCC GGTCGCGCTT GCCAACCAAA TCAGCACTTC GCCCGAGACG
ATCGGTGCGC TCGCCGGCAA GACCGGCCTG TTCGGAGACA ACGCTGAACG CAAACACGCG
CTTTCCCGGA TCGATGCGCT GGCTTCGCAT GTTCGCCAAT CCGCCAACAC CTGGCAGCGT
CGCCTTGCGG CTGAATGCGG CTCGGAGCGC TGGAAGCGGG AAAAGCAGGA CGTCGTCGAG
GTTCTGGGGC CGAGCCGCCG GAGCGAAGCG TTGCTGCGCA ATCTCGATGA TCTCCCCTAT
AGCGACAAGG CAAAGTTCGT CGAACGACTG GCGGCGACAT CGGAGGGCCG TCAGGCGCTT
GCCGAGGCAA AGGATATCGT CAGCGCAATC GAAACGCGCT TCGGTCGCGC CGATCCCTCA
GATCTCGCGG ATCAGCTGAA GCGAGTGGGA CCGGATCGGG CTGGTGACGT CGAGCGTATC
CGCGAGGTTG CTCGCCTTGC CGATCGTAGT CATCGTGCCG AGCTCACCCA GCAGATGGAG
TTGAAACGGT CCCTTTCGCG CACGAAGAGT TTGGGATTGG GGATGTAG
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| Protein sequence | MAIYHLSMKP IARSGGRSAV ASAAYRAAER LTNERDGLTH DFSNRTGVEH AEIVLPAGSS
AYWAMKRSAL WNAAERAEKR SDARIAREFE IALPHELTPD QRLVLTRAFA EDLANRYGAA
VDFAIHRPGE GSDIRNSHAH LMMTTREVRE TGLGDKTLLE RENRWLLANH LPPSQLQLKD
LRQAWEHLAN EHLERAGHDI RIDHRSHLEA GITIEPSEHV GVHATQIDRQ GGAVSRVRIS
PQSADRNAEI VRRRPEEILK LITNEKSVFS RYDIARALHR TINDDPQTFQ NAFASVMASK
ALVELRPDSS SVRGRDGEAR YSTVEMVAIE GAMATATVAM KARQNHGVAK RYVDAAIADQ
DRSIQAGNPS PGQGLSAEQR QAIEHVTGAS QIAVVIGFAG AGKSTMLAAA RHAWEAQGYR
VHGAALAGKA AEGLEQSSGI SSRTLASWEY SWQADRGRLN ARDVFVIDEG GMVGSRQLAR
FVDEVKRAGA KLVLVGDHEQ LQAIGAGAPF RAIAEAVGHA QLSEVRRQKA DWQKQASIDF
ASHRTAAGLS AYEARGSVHL KTDRAETLKV IIADYVADRS ANPNDTRIAM AHRRDDVRAI
NAGIRARLQE RGELSRSTGT SDDRGEELTY QTNNGKRSFA RGDRIVFLEN DRDLAVKNGM
LGEVIAVAPD AIQVRLDGKA QTQDGQRQVT VPVNRYQSFD HGYATTIHKT QGATVDRSFV
LASTTMDRHL TYVAMTRHRE EVQLYASLDA FKTVRSLTET LSRSGVKETT LDYTHDFANR
RGMNDRRGQG ESEVASQGIS KGIQPIPDTA VPKPMQEPRP LAARTIADGG SSHQDPNVDE
RDDERRVLVA AVKTYAMSVE AVGRAKAMPA FERDWAAAKQ LAPQVFKDAP AAMDVLRGRI
LDENADPVAL ANQISTSPET IGALAGKTGL FGDNAERKHA LSRIDALASH VRQSANTWQR
RLAAECGSER WKREKQDVVE VLGPSRRSEA LLRNLDDLPY SDKAKFVERL AATSEGRQAL
AEAKDIVSAI ETRFGRADPS DLADQLKRVG PDRAGDVERI REVARLADRS HRAELTQQME
LKRSLSRTKS LGLGM
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