Gene Rleg_6538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6538 
Symbol 
ID8017061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp255142 
End bp255645 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content59% 
IMG OID644828325 
Producthypothetical protein 
Protein accessionYP_002979525 
Protein GI241554312 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.139702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCGC AGAGCTTCGT CAACAGGATG CCGCTCGGTC TAAAAGCCGG GCGCGCGACG 
TTCGAGTTTA TCGGCGGCAG TCTCCTCGTC GCAACGATCT ATTATCCCGG CGATCAAAGC
CACAGCTACA TCCGTCGCGA TGAAACGGCA AGAAAGGGTC TGACCGTCCG CGGCGGCTTC
GCAGAGGGAT TTGGCCTTCG CGCCGAGGCT TTGAAAAAAA TGCTGCGCCG TGAATGGAAA
CGGTTGGGAC TGATACAGCT CCCGGGCACA TCGCTGGCGG AGCCTGGCAT CGATGCACAT
TTCGCCGGCA CTCTGCCTAT GGGCGCAGCC GGCCCGTTCG GTACTTCTTC GGATGGCGAC
ATGAATCTTC ATCCCGGTCT TTACGTCGTC GATGGTTCAA TTCTTCCCGA TCTTTCCTCG
AAATACGTCA CGATGACGAT CATGGCCAAT GCCGACCGCA TCGCTCACCG TCTCGCCGAG
ACGGAAGCAA ACTCGGCGCT CTGA
 
Protein sequence
MPAQSFVNRM PLGLKAGRAT FEFIGGSLLV ATIYYPGDQS HSYIRRDETA RKGLTVRGGF 
AEGFGLRAEA LKKMLRREWK RLGLIQLPGT SLAEPGIDAH FAGTLPMGAA GPFGTSSDGD
MNLHPGLYVV DGSILPDLSS KYVTMTIMAN ADRIAHRLAE TEANSAL