Gene Rleg_6533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6533 
Symbol 
ID8017056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp251274 
End bp252152 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content59% 
IMG OID644828320 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002979520 
Protein GI241554307 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.824779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0156091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CACGCCCCCG CTCGCGCAAA TCGCCCTACC CGCTGTGGTT TTTCATTCCG 
GCCGCAATCA TCTACGGCGT GCTGTTTCTG GTTCCCACTG TATCCTCTCT TTGGTTCAGC
CTCACGCGCT GGGATCTTTC GACCGCCGAA TTCATCGGGC TCGAAAACTT TCAGCAGTTC
TTTTCCGAAC CATTCCTGGT CAAGGGACTG GTCAACACGC TGATCTATGC CGTGACGACA
TCCGGCCTGA AGACGGTCTG CGGGCTGCTG CTCGCCGTGC TCCTGACCAG CAATATCTTT
GCCCGCGGCT TCCTGCGCAC GCTGGTCTTC TTTCCCGTCC TGGTCTCGAC GATCGGCATC
GGCATCACCT TCACAGTGAT GATGCATCCA ACCAGGGGCA TCATCAACGT CACGCTCGAA
ACGCTCGGCA TTCCCGGCCC GGGATGGCTC ACCAATCCGG CGCTGGCGCT TTTTTCGGTG
GCTTTGGTCG ATGTCTGGAA GGGTGTCGGC CTCGCAACGC TGATCTTCAT CGCCGGCCTT
GCTGCGATCA GCCCCGATTA TTATGAGGCC GCGCGGATTG ACGGCGCCAC GCGTCTCCAG
CAATTTTTCC GAATCACTCT GCCACTCGTG CGTCCCGCCA CTGTCATCGT GGTGACATTG
TCGCTGATCG GCGGGCTTCG ATCCTTCGAT CTGATATGGG CCATGACCCG CGGCGGGCCA
GGTTTCTCCT CCGATGTGGT CGCCTCGGTG ATCTATAAGC AGTACCAGGC GGGTTTCTAC
GGCCTGTCGA CGGCCGGAAA CGTCATCCTG TTTGCGCTAA TCGCCGTAAT CATCCTGCCA
TTCACCCTGT GGTTCAACCG GCGCGAGGTC GAGGAATGA
 
Protein sequence
MTETRPRSRK SPYPLWFFIP AAIIYGVLFL VPTVSSLWFS LTRWDLSTAE FIGLENFQQF 
FSEPFLVKGL VNTLIYAVTT SGLKTVCGLL LAVLLTSNIF ARGFLRTLVF FPVLVSTIGI
GITFTVMMHP TRGIINVTLE TLGIPGPGWL TNPALALFSV ALVDVWKGVG LATLIFIAGL
AAISPDYYEA ARIDGATRLQ QFFRITLPLV RPATVIVVTL SLIGGLRSFD LIWAMTRGGP
GFSSDVVASV IYKQYQAGFY GLSTAGNVIL FALIAVIILP FTLWFNRREV EE