Gene Rleg_6497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6497 
Symbol 
ID8017159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp210855 
End bp211559 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content62% 
IMG OID644828286 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_002979486 
Protein GI241554273 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.121747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGA GGAATGTCGA CTGGGGCAGT ATCCGGTTCG TCGTCTTCGA CGTCGACGGA 
ACGTTATACA ACCAGCGCAT GCTACGCCTT CGAATGGCCG GCGAATTGAT TGCTGATGCA
GTGGCGAGAG GCAGCCTGAC CAATCTGCGT GTGCTACGCG CATACCGCTC CTTGCGTGAA
GCCATCGGCG AGGGGGAGAT CGACGATTTT CAGGCGAGCC TGATGACGCG AACCGTCGCG
CGAACCGGCC AGCCAGCCGA AAGGATAGAG GCAATCGTCA GCGAGTGGAT CGAGCGCCGT
CCGCTCGCCT ATATCGCATC CTGCCGGTAT GATGGGCTGG TGGAGTTGTT TGCCGGGCTC
AGACGGCAGA ACAAGTCGAT CGGGATTTAT TCTGATTATC CTGCCGACGA GAAGCTGCAG
AGGATGACAT TGTCGGCCGA TTACATATTG GCCGCAAGCG ATCCCGGCGT CGGCATCCAG
AAGCCTGATC CGCGCGGCCT GCAGATGCTG ATGCAGCGCG CCGGCGTCGG CCCGGCGCAA
ACCGTATTGA TAGGCGACAG GCCCGAGCGG GATGGCCTTG CGGCGCGGCG CGCCGGTGTC
CTGCCGCTCA TTCGCTCCGA CGGGCCACGC GAGGGCTGGC TGACCTTTTC GACCTATTCG
GACCCTGTGT TCGCAGCGCT GCGGGCAAAG GAAGCGTCCG GATGA
 
Protein sequence
MIARNVDWGS IRFVVFDVDG TLYNQRMLRL RMAGELIADA VARGSLTNLR VLRAYRSLRE 
AIGEGEIDDF QASLMTRTVA RTGQPAERIE AIVSEWIERR PLAYIASCRY DGLVELFAGL
RRQNKSIGIY SDYPADEKLQ RMTLSADYIL AASDPGVGIQ KPDPRGLQML MQRAGVGPAQ
TVLIGDRPER DGLAARRAGV LPLIRSDGPR EGWLTFSTYS DPVFAALRAK EASG