| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6461 |
|---|
| Symbol | |
|---|
| ID | 8017129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012854 |
|---|
| Strand | - |
|---|
| Start bp | 179286 |
|---|
| End bp | 180599 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644828256 |
|---|
| Product | nitrate ABC transporter, substrate-binding protein |
|---|
| Protein accession | YP_002979456 |
|---|
| Protein GI | 241554243 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.325074 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGA ATTTGCAGAC TGGGATTTCG ACAACCGGCA TTACCCGCCG CAGCATGCTC
AAGACGACTG CAGCGGCTGC CCTCATCGGC GCTGTCAAGA CGGCCTTTCC ATCCGGCGCC
TTCGCAGCCG GAGCAGGCCC TGAGGTGAAG GGCGTCAAGC TCGGTTTTAT CGCTCTCACC
GATTCCGCGC CGCTGATCAT CGCCAAGGAA AAGGGCTTTT TCGACAAGCA TGGCCTTCCG
GAAACGGATG TGGCCAAACA GGCCTCCTGG GGTGCGACCC GCGACAACCT CGTGCTGGGT
GGCGCCGCAA ACGGCATCGA CGGTGCGCAT ATCCTGTCGC CGCTCCCCTA TCTCATGCAT
ACCGGCAAGG TGACGCAGAA CAATAAGCCG GTGCCGATGG CAATCCTCGC GCGGCTCAAC
CTCGACAGCC AAGGCATTTC CGTCGCCAAG GAATATGCCG ACACCGGCGT GCAGCTCGAT
TCCTCCAAGC TGAAGGCGGC ATTCGAGAAG AAGAAGGCGG AGGGCAAGGA GATCAAGGCC
GCCATGACCT TCCCGGGCGG CACCCATGAC CTCTGGATCC GCTACTGGCT CGCCGCCGGC
GGCATTGATC CGAGCAAGGA CGTTTCGACC ATCGTCGTGC CGCCGCCGCA GATGGTTGCC
AACATGAAGG TCGGCAACAT GGACGTCTTC TGTGTCGGCG AACCGTGGAA TGAGCAGCTC
GTCAACCAGG GCATCGGCTT TACCGCAGCC ACCACCGGCG AGCTCTGGAA GGGTCATCCT
GAAAAGGCGC TCGGACTGCG CGCCGAATGG ATCGAAAAGA ATCCCAATGC TGCCAAGGCC
CTGCTGATGG CTGTCATGGA GGCGCAGCAG TGGTGCGAAA GCATGGACAA CAAGGCGGAG
ATGGCTGACA TTCTCGGCAA GCGCCAATGG TTCAACGTTC CGACCAAGGA CGTGCTCGGC
CGCCTCAAGG GCGACATCAA TTATGGCAAT GGCCGCGAGG TCAAGGCCAC CGACCTCTAT
ATGAAGTTCT GGAAAGACGG CGCCTCCTAT CCGTTCAAGA GCCACGACAC ATGGTTCATG
ACGGAAAACA TCCGTTGGGG AAATCTGCCG GCGAGCACCG ACATCAAGGC GCTGGTCAAC
CAGGTGAACC GTGAAGACAT CTGGCGCGAG GCCGCCAAGG ATCTCGGCGT CGCGGCGGCC
GATATCCCCG CATCGTCTTC TCGCGGCAAG GAGACTTTCT TCGACGGCAA GGTCTTCGAC
CCTGAAAATC CTTCGGCCTA TCTCGACAGC CTTTCGATCA AGGCTGTCTC CTGA
|
|---|
| Protein sequence | MTKNLQTGIS TTGITRRSML KTTAAAALIG AVKTAFPSGA FAAGAGPEVK GVKLGFIALT
DSAPLIIAKE KGFFDKHGLP ETDVAKQASW GATRDNLVLG GAANGIDGAH ILSPLPYLMH
TGKVTQNNKP VPMAILARLN LDSQGISVAK EYADTGVQLD SSKLKAAFEK KKAEGKEIKA
AMTFPGGTHD LWIRYWLAAG GIDPSKDVST IVVPPPQMVA NMKVGNMDVF CVGEPWNEQL
VNQGIGFTAA TTGELWKGHP EKALGLRAEW IEKNPNAAKA LLMAVMEAQQ WCESMDNKAE
MADILGKRQW FNVPTKDVLG RLKGDINYGN GREVKATDLY MKFWKDGASY PFKSHDTWFM
TENIRWGNLP ASTDIKALVN QVNREDIWRE AAKDLGVAAA DIPASSSRGK ETFFDGKVFD
PENPSAYLDS LSIKAVS
|
|---|
| |