| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6454 |
|---|
| Symbol | amiF |
|---|
| ID | 8017122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012854 |
|---|
| Strand | - |
|---|
| Start bp | 172202 |
|---|
| End bp | 173218 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644828249 |
|---|
| Product | formamidase |
|---|
| Protein accession | YP_002979449 |
|---|
| Protein GI | 241554236 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.37022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0467155 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAC TTGGCGGTCT CAACAAATCC GAACACGGCG TCGGTATCGG CCTGGTGCAG
CTCCAGCTGC CGGTGACCGT TACCAAAGCG GACTTGGCAA AACAGACGCA GGTGATCGTT
GATCTGGTGG CCAAAGCGCG GCGCAACCAG CCGGGCATGG ACCTCGTCGT CTTTCCCGAA
TACGCGCTGC ATGGCCTTTC CATGGACATC AATCCGGAGA TCATGTGCAC GCTCGACGGG
CCGGAGGTCG CGGCCTTCAA GCAGGCCTGC AGGGACAACC GGATCTGGGG CTGCTTCTCG
ATCATGGAGC TGAACCCTGG CGCCATGCCC TACAACTCCG GCATCGTCAT CGACGATCAG
GGCGAGTTGA AGCTCTATTA CCGCAAGATG CATCCCTGGA TCCCCGTCGA GCCCTGGGAG
CCCGGCGATC TTGGCATCCC TGTCATCGAG GGCCCGCGGG GCGCGAAGCT CGCTCTGATC
ATCTGCCATG ACGGCATGTT CCCGGAGATG GCGCGCGAAT GCGCCTACAA GGGCGCCGAA
ATCATGATCC GCACAGCCGG CTACACGGCG CCGATCCGCG ATGCCTGGTG CTTCACCAAC
CAGGCCAACG CCTTCTGCAA CCTGATGATC ACCGCGAATG TCTGCATGTG TGGCTCGGAC
GGAACGTTCG ATTCCATGGG TGAAGGCATG ATTTGCAATT TCGATGGCAC GATCATCGCC
CACGGAACCT CCGGCCGCGT CAACGAGATC ATCACCGCGG AGGTGCGTCC CGATCTCGTT
CGCGAGGCCC GGCTCGGCTG GGGCGTGGAG AATAATATCT ACCAGTTCGG TCATCGCGGC
TACGTCGCCG TCGCCGGCGG CGCGCAGGAT GCGCCCTACA CCTACATGCA CGACCTTATC
GCCGGCAAAT ACCGCCTGCC ATGGGAAGAC GAGATAAAGG TCAAGGACGG CACGTCCTGC
GGATTTGACA AGCCGATGCG CCGTTACGGC GAACCCCTCA AACCTGCCGC GGAATAG
|
|---|
| Protein sequence | MNGLGGLNKS EHGVGIGLVQ LQLPVTVTKA DLAKQTQVIV DLVAKARRNQ PGMDLVVFPE
YALHGLSMDI NPEIMCTLDG PEVAAFKQAC RDNRIWGCFS IMELNPGAMP YNSGIVIDDQ
GELKLYYRKM HPWIPVEPWE PGDLGIPVIE GPRGAKLALI ICHDGMFPEM ARECAYKGAE
IMIRTAGYTA PIRDAWCFTN QANAFCNLMI TANVCMCGSD GTFDSMGEGM ICNFDGTIIA
HGTSGRVNEI ITAEVRPDLV REARLGWGVE NNIYQFGHRG YVAVAGGAQD APYTYMHDLI
AGKYRLPWED EIKVKDGTSC GFDKPMRRYG EPLKPAAE
|
|---|
| |