Gene Rleg_6450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6450 
Symbol 
ID8017118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp168214 
End bp168882 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content63% 
IMG OID644828245 
Productisochorismatase hydrolase 
Protein accessionYP_002979445 
Protein GI241554232 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0382853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGGA TCAAGGCAGA ACCCTTCGCC TTTCCGGTGA AACACGATGA GCTCGCCCTC 
ATCGTCATCG ACATGCAGCG CGATTTCGCC GAGCCGGGCG GATTCGGCGC CAGCCTCGGC
AACGATGTCA GCCGCATCAC CAGGATCGTG CCCGATGTCA AACGCCTCAT CCAGGGCTTC
CGCAATGCCG GCCTGCCTGT GATCCATACG ATGGAGTGCC ACCGGCCTGA TCTCTCCGAC
CTGCCACCGG CCAAACGCGA CCGCGGCAAT CCTGCGCTCA GGATCGGCGA CGAAGGCCCG
ATGGGCCGCA TCCTGATCTC GGGCGAACCC GGCACGGCAA TTCTTCCGGA GCTCGCTCCG
GTGAAGGGCG AAGTCGTCAT CGAAAAACCC GGCAAGGGCG CCTTCTACGC GACCGACCTC
GGCACCGTGT TGCAGCAGAA GGGCATACGT CAGCTCGTCT TTGCCGGTGT CACCACCGAA
GTCTGCGTGC AGACGACGAT GCGCGAAGCA AACGACCGCG GCTATGAATG CCTGCTCGCC
GAGGAGGCCA CGGAAAGCTA TTTCCCCGAA TTCAAAGCCG CCGCCATCGC CATGATCCGC
GCCCAGGGCG CGATCGTCGG CTGGACCGCC CATATCGACG ACATTCTGGA AAGCATCGCC
CATGCCTGA
 
Protein sequence
MMGIKAEPFA FPVKHDELAL IVIDMQRDFA EPGGFGASLG NDVSRITRIV PDVKRLIQGF 
RNAGLPVIHT MECHRPDLSD LPPAKRDRGN PALRIGDEGP MGRILISGEP GTAILPELAP
VKGEVVIEKP GKGAFYATDL GTVLQQKGIR QLVFAGVTTE VCVQTTMREA NDRGYECLLA
EEATESYFPE FKAAAIAMIR AQGAIVGWTA HIDDILESIA HA