| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6448 |
|---|
| Symbol | |
|---|
| ID | 8017116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012854 |
|---|
| Strand | + |
|---|
| Start bp | 167025 |
|---|
| End bp | 167816 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644828243 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002979443 |
|---|
| Protein GI | 241554230 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0465386 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTC CTGCGATCGC AGTCAAAAAT CTCGTCAAGA CCTTTGGCGG TTCCACCGTG
CTGCAGGGCA TCGACCTCGA CATCGTTCAG GGACAGGTTT CCTGCGTCAT CGGCCCATCC
GGATCCGGCA AGAGTACGCT GCTGCGCTGC ATGGCGTTTC TCGAGGAATC GACGAAGGGT
ACGATTGCCG TCAACGGCGA GGTGCTTGGC TTTGCGGAAA ACGCCAAGGG CGTCCGGGAG
CGGGTGCCGG CGGCGGCGAA CCGGCGGATC CGATCCCAGA TCGGCATGGT TTTTCAGCAG
TTCAATCTCT GGCCGCATAT GACCGCGCTC GGCAATGTCA GCGAGGCGCT GAAGTCCGTT
CACAAGATGA GCCGCAAGGA TGCTGAGGAG CGGGCAATGG CCCAGCTCGT CAAGGTCGGC
CTCGAGGGCA GGGCAGGGCA CTATCCGTCG CAGCTCTCGG GAGGGCAACA GCAGCGCGTC
GCCATCGCCC GGGCGCTAGC CCTCAACCCG AAGATCATGC TGTTTGACGA GCCGACCTCG
TCACTTGATC CCGAGCTGAC CGGCGAGGTG CTCAACGTCA TGCGCGATCT CGCCGCCGAG
GGCATGACGA TGGTCGTCGT CTCCCACGAG ATCGGATTTG CCGCGACGGT CGGCCAGCAG
ATCATCTTTC TCGATCACGG CAAGGTGCTG TTCACCGGCC CGCCGCAGGA CGTCTTCAAA
CGGCCGAGAA ATCCCCGCCT CGAGCAATTT CTGGATACCT ATATCGATCG CGGCGCCTCG
ATGCTGCTGT GA
|
|---|
| Protein sequence | MSIPAIAVKN LVKTFGGSTV LQGIDLDIVQ GQVSCVIGPS GSGKSTLLRC MAFLEESTKG
TIAVNGEVLG FAENAKGVRE RVPAAANRRI RSQIGMVFQQ FNLWPHMTAL GNVSEALKSV
HKMSRKDAEE RAMAQLVKVG LEGRAGHYPS QLSGGQQQRV AIARALALNP KIMLFDEPTS
SLDPELTGEV LNVMRDLAAE GMTMVVVSHE IGFAATVGQQ IIFLDHGKVL FTGPPQDVFK
RPRNPRLEQF LDTYIDRGAS MLL
|
|---|
| |