Gene Rleg_6445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6445 
Symbol 
ID8017113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp164796 
End bp165623 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content61% 
IMG OID644828240 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002979440 
Protein GI241554227 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0216332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAC ATTCACTGCT GAAGGGTCTG GTCGGCGCCG CGTTCCTGCT CGGAGCAGCC 
GTTTCCGCCC ATGCCGCCGA CACGCTGGCA GCCGTCAAGG CAGCCGGCAC CCTCAAGGTC
GGCACCGAAA CGGCTTTCGC ACCGTTCGAC TATATCGATG CCGGCGAACA CACGGGCTTG
AACGTCGACC TCTTTGCCGA GATCGGCAAG GAACTCGGCG TCAAGATCGA GTGGGTCGCC
CTTCCCTGGG ACGGCGTCTT CCCGGCGCTC GAGGCCGGCA AGTTCGATGT CGTCGCAGGT
CCTGCAACGA TCACCAAGAA GCGCATGGAG CGCTATCGCT TCACGCCGCC GATCGCCGAA
GCAACGATTG CCATTCTGAA GAAGGCTGGC GACACGACGA TCAGCAAGCC GGAAGATATT
GCCGGCAAGA CGATCGGTGT CGGCAAGGCA ACTGCGCAGC TCGACCAGCT GAAGGAATTC
TCCGCCACGC TGCCGACCAA GGTCGACGTG CGCGAATATC CCGCCTTTAC CGAATCCTAC
GCCGATCTCG CCGCCGGCCG TATTGCCGGC GTCGCCAATT CGCTGCCGAA TATCGCCTTC
GTCGCCAGCC AGCGAAAAGG CACCTTCGAA GTCGTCCTGC CGCCATTCGG CAAGAAGTCC
TATTTCGGCT TCATCGGTCT CAAGGATGCC GACCATGCGC CCCTGATGGA TGCGATCGAC
GCCGCGATGC TCAAGATCAA GGCAGACGGG CGCATGGCAG AGCTGCAGAA GAAGTGGTTT
GGTGCATCTT TCGATACGCC TGATGCTGTC AAGGACCCGG CATTCTGA
 
Protein sequence
MKAHSLLKGL VGAAFLLGAA VSAHAADTLA AVKAAGTLKV GTETAFAPFD YIDAGEHTGL 
NVDLFAEIGK ELGVKIEWVA LPWDGVFPAL EAGKFDVVAG PATITKKRME RYRFTPPIAE
ATIAILKKAG DTTISKPEDI AGKTIGVGKA TAQLDQLKEF SATLPTKVDV REYPAFTESY
ADLAAGRIAG VANSLPNIAF VASQRKGTFE VVLPPFGKKS YFGFIGLKDA DHAPLMDAID
AAMLKIKADG RMAELQKKWF GASFDTPDAV KDPAF