Gene Rleg_6443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6443 
Symbol 
ID8017111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp162892 
End bp163830 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content61% 
IMG OID644828238 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002979438 
Protein GI241554225 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0226861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATG AGCGCCTCAA GGCGATCCCG CTGAAAAGTT TGCAGGCGTT CGAGGCGGTG 
GGGCGCTGCG GCGGCGTGAC GGCAGCGGCG CTGGAGCTCA GGGTTTCGCC GGGCGCCATC
AGCCAGCAGA TCCGCAAGAT CGAAAGCTTT CTTGGAATTT CGCTTCTGGA ACGCAGCGGG
CGAACCGTCG AGCTGACCGC CTGGGGCCGG CTCTACCATC AGGAGATATC GAAGGGGTTC
GAGCAATTTG CGCTGGCCCA GCAATTGTTG GAAAAGGCGC GCAACGAGAC GGCGCTGGTG
CTCAGTGCGC TTTCCTCCGT CGTCAACAAA TGGATCGGCA GGCGCATCTT CGACTGGCAG
GCGCTTCATC CCGAAGTTCC AGTGAGGATT ATCGGACGCG ACAAAGAGCC CCGGATCGGT
TTCGACGATG TCGATTTCCG CGTCAGCTAT GGATCGGACG TCCTCCAGCA CGAACACTAT
ACCGAACTGT TCCGCGATTG GGTGGTGCCT GCCTGCTCGC CGGCGCTGAT GCAGGATCGC
GCGCATGCGG CTCGCGATCT TTTCGAAAAG CCCCTCCTCC ATGTCGAGTG GGAACGGCAC
TTCACCCCTT ATCCCAGCTG GGCGGAGTTT GCCGCCAAGG CCGGTGTCCC CCTCGATGCG
TCGACGCCGG GCCTTTCCTT CACTCTTTCG AGCAGCGCGA TTGATGCTGC TGTCAACAAG
CGCGGCGTCG TGCTCGCACA AATGTCGATG ATATCAGACG AGCTTGAAGC GCAAACGCTG
GTCATTCCCG TCGACCTGCG CATTGCACTG CGCGAAAGCT ATTTTCTCGC CTGGGACCGT
GCGGCCTTGC AGAAGCCCCA CGGGCACGAA TTCCGCGAGT GGCTCATTGC CATTTCCCGT
CAGCAGGCCC TGGCGTCAGC GCCTAAGCCG ATACTTTAG
 
Protein sequence
MTDERLKAIP LKSLQAFEAV GRCGGVTAAA LELRVSPGAI SQQIRKIESF LGISLLERSG 
RTVELTAWGR LYHQEISKGF EQFALAQQLL EKARNETALV LSALSSVVNK WIGRRIFDWQ
ALHPEVPVRI IGRDKEPRIG FDDVDFRVSY GSDVLQHEHY TELFRDWVVP ACSPALMQDR
AHAARDLFEK PLLHVEWERH FTPYPSWAEF AAKAGVPLDA STPGLSFTLS SSAIDAAVNK
RGVVLAQMSM ISDELEAQTL VIPVDLRIAL RESYFLAWDR AALQKPHGHE FREWLIAISR
QQALASAPKP IL