Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6443 |
Symbol | |
ID | 8017111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | - |
Start bp | 162892 |
End bp | 163830 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644828238 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002979438 |
Protein GI | 241554225 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0226861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGATG AGCGCCTCAA GGCGATCCCG CTGAAAAGTT TGCAGGCGTT CGAGGCGGTG GGGCGCTGCG GCGGCGTGAC GGCAGCGGCG CTGGAGCTCA GGGTTTCGCC GGGCGCCATC AGCCAGCAGA TCCGCAAGAT CGAAAGCTTT CTTGGAATTT CGCTTCTGGA ACGCAGCGGG CGAACCGTCG AGCTGACCGC CTGGGGCCGG CTCTACCATC AGGAGATATC GAAGGGGTTC GAGCAATTTG CGCTGGCCCA GCAATTGTTG GAAAAGGCGC GCAACGAGAC GGCGCTGGTG CTCAGTGCGC TTTCCTCCGT CGTCAACAAA TGGATCGGCA GGCGCATCTT CGACTGGCAG GCGCTTCATC CCGAAGTTCC AGTGAGGATT ATCGGACGCG ACAAAGAGCC CCGGATCGGT TTCGACGATG TCGATTTCCG CGTCAGCTAT GGATCGGACG TCCTCCAGCA CGAACACTAT ACCGAACTGT TCCGCGATTG GGTGGTGCCT GCCTGCTCGC CGGCGCTGAT GCAGGATCGC GCGCATGCGG CTCGCGATCT TTTCGAAAAG CCCCTCCTCC ATGTCGAGTG GGAACGGCAC TTCACCCCTT ATCCCAGCTG GGCGGAGTTT GCCGCCAAGG CCGGTGTCCC CCTCGATGCG TCGACGCCGG GCCTTTCCTT CACTCTTTCG AGCAGCGCGA TTGATGCTGC TGTCAACAAG CGCGGCGTCG TGCTCGCACA AATGTCGATG ATATCAGACG AGCTTGAAGC GCAAACGCTG GTCATTCCCG TCGACCTGCG CATTGCACTG CGCGAAAGCT ATTTTCTCGC CTGGGACCGT GCGGCCTTGC AGAAGCCCCA CGGGCACGAA TTCCGCGAGT GGCTCATTGC CATTTCCCGT CAGCAGGCCC TGGCGTCAGC GCCTAAGCCG ATACTTTAG
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Protein sequence | MTDERLKAIP LKSLQAFEAV GRCGGVTAAA LELRVSPGAI SQQIRKIESF LGISLLERSG RTVELTAWGR LYHQEISKGF EQFALAQQLL EKARNETALV LSALSSVVNK WIGRRIFDWQ ALHPEVPVRI IGRDKEPRIG FDDVDFRVSY GSDVLQHEHY TELFRDWVVP ACSPALMQDR AHAARDLFEK PLLHVEWERH FTPYPSWAEF AAKAGVPLDA STPGLSFTLS SSAIDAAVNK RGVVLAQMSM ISDELEAQTL VIPVDLRIAL RESYFLAWDR AALQKPHGHE FREWLIAISR QQALASAPKP IL
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