| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6437 |
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| Symbol | |
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| ID | 8016936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012854 |
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| Strand | + |
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| Start bp | 155373 |
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| End bp | 157739 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644828232 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002979432 |
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| Protein GI | 241554219 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00543236 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCAGATCG TTCTTCCTTC CAGCTCCAAT ACGTTTCAGC AATCCTGGAT CGCCTCCGGG
AGAATTCTGT TCCTTATTGC CGTCAGCGGG CTCGGAGCGA TCGGGCTTGT CGTACTCTCG
GCGCTCTGGG CAGGAACCGA AAGCGATGCC GCAGCCCTCG ATCGACAGCG TCAGCTTGTG
AATGCCCGCC TGCGCGAACA GGTCGATCAA GTCGCGCATG TTATCGGCCA GTTCGGCAAT
GGCTATCTCG CACGTGTCTA TCCTGCCGCC CTTTCGACCG AAGGCTCCTC CGGCCTCGAT
GCCGTTTTGA CGGCAGCAGC CGGGAGTGCG ATCGGCCAGA CGGCTATGTC GGCGTTCGGC
TACGACCAGG CCTTTGTTGT CGATGAAAAG GCGCAACTGC TCATGCTGGC GGACGCCCAA
ACGGAGAAGC GGTACCGCTG GATGAGGCCT CTCTTTTTGC CTCTCCTTCA GGATGCCCGC
TTTGGGGTCA GGCGAAGCAC GGCTTTGAAC GAAAGAACGC CATCCTCAAT GGAAGCCCGC
CTTGCGAGCG CCGCCCATTC CAACCGTGCT CTGGCCAATC TGATGCGGCT CGAGGGCCGG
CCGACCATCG TCGGAGTCGT CGCCATTAAC GAGGCTGCCG GGGGACAGCG CCAGCCGATG
CGGCAATTCC TGATCGTCGT GCGCTTTATC GATGGTGCGG CGCTGGACGA ATTGAGCCGG
CAACAGGGCC TTAACGGCGC CCGCTTCGCG CGCACCGCCG ATGCGGACGA AAATGAGGTT
GCGTTCCAGA TTGACGCCAC GGCAAACGGC GAACCGATCG GCTTTATCGT ATGGCGGCCG
GATCTTCCAG GTTCGAGGGT GATCGGTCGA TTGATGCCGG CGCTTTCGAT TGCCGCCTTG
GTGATCGCGA TCCTGTTCTC GGTCTTGCTG GTGCGCCTGC GAAGGAGTCT CGGCGAGTTG
AAGAAAAGCG AGCTGCATGC AAGGCAGCTT GCCTTGCATG ATGTGCTCAC CGATCTTCCC
AACCGCGCTT TGTTCGCTAT GAGGTTCGAC GAGTGCCTGG CCGAGACGCA GAATTCGACC
GAGCGCTCGG CGGTCGCACT TCTCGACCTC GATCGCTTCA AAGCGGTGAA CGACACATTC
GGCCATGCCG CCGGCGATGA ACTCATCAGG ATGGCCGCCG AGCGGATCCG CTCGCTGCTT
CGTCCGGGCG ACACGCTTGC CCGGCTAGGG GGCGACGAAT TTGCGCTGCT TCTCCGGGAC
ATCAAAGATC ATGACCACGT TTTGCCGGCA ATATGCGAAG CGATCGTTGC CGAACTTGGC
AAACCCTTCC CGCTTTTGCG CGGCGAAGCG GTTGCGCGCG TCGGCGGCTC GATCGGCGTG
ACCGTCGTGC CGGATGCCGG GCGGAATGCC GATGACATCA TGCGCTACGC CGACGTCGCG
CTGTACGAGG CAAAGATGGG CGGCCGAGGC CAGTGGCGTC TCTATTCACC GTCCATGGAC
GGCGGCCGAA ATGCACGCGA CATTCTCAAG AACGAATTGC GGGAAGTTCT GGCCAAAGGC
ATGGCCTCAG ATGGTCCACA CGCCGATCCG GTTTCGAACC GGCCGGACTT CGGATCGCTC
GAGGTCTATT ACCAAACGGT CCATCGCGCT GAGGCAGGAT ACGCGGCGTC GGGCGCGGAA
GCTCTCGTGC GTTGGCGTCA CAGTCAGCGC GGGCTGTTGA CGCCTGCCAG CTTCATCCCT
GTCGCCGAGG AGGGCGGCCT CATCGACGCT CTCGGTTTCT GGGTCTTGCG CGAAGCCTGC
AGAGCCGCCT GCAAATGGCC GGAGGACACG TTTGTTGCGG TCAACGTGTC TCCTGCCCAG
TTGAGAAGAC CGAATTTCGC CGAGGAAGTT TTCGCCGTGC TTGAGGAGAG CGGTCTGCAG
CCGTCCCGGC TCGAGCTCGA ACTCACCGAG TCCTCACTGA TCGAGGACAA CTCGGACGTT
TATACGGTGC TGAAGTCGTT GCGCAGCCGG GGTGTCCAGG TTTCGCTGGA TGATTTCGGA
ACTGGCTTTT CATGCCTCAG CCATCTCCTG CGCTTCGATA TCGACCGCAT CAAGATCGAT
CGATCGTTCG TCTCACAGCT CGGCACCAAG GCCAATGGGG CGGCAATCAT TGGCGCCATC
GTCGCGCTCA GCCGTAACCT CGGTATCTCG ACGACGGCCG AAGGGGTCGA AACCGATTAT
CAACGCGACT TTCTGGCCGC CCTCGGCTGC ACCGACCTCC AAGGCTACTT CTTCTCCAAA
CCCGTTCCTA TTGGCGAGCT TGATAGTTTC CGGAAAGCTG AAAGCGCCGC TGGGTTACTG
ACGACCGCCC GAGGCGCCGT CGCGTGA
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| Protein sequence | MQIVLPSSSN TFQQSWIASG RILFLIAVSG LGAIGLVVLS ALWAGTESDA AALDRQRQLV
NARLREQVDQ VAHVIGQFGN GYLARVYPAA LSTEGSSGLD AVLTAAAGSA IGQTAMSAFG
YDQAFVVDEK AQLLMLADAQ TEKRYRWMRP LFLPLLQDAR FGVRRSTALN ERTPSSMEAR
LASAAHSNRA LANLMRLEGR PTIVGVVAIN EAAGGQRQPM RQFLIVVRFI DGAALDELSR
QQGLNGARFA RTADADENEV AFQIDATANG EPIGFIVWRP DLPGSRVIGR LMPALSIAAL
VIAILFSVLL VRLRRSLGEL KKSELHARQL ALHDVLTDLP NRALFAMRFD ECLAETQNST
ERSAVALLDL DRFKAVNDTF GHAAGDELIR MAAERIRSLL RPGDTLARLG GDEFALLLRD
IKDHDHVLPA ICEAIVAELG KPFPLLRGEA VARVGGSIGV TVVPDAGRNA DDIMRYADVA
LYEAKMGGRG QWRLYSPSMD GGRNARDILK NELREVLAKG MASDGPHADP VSNRPDFGSL
EVYYQTVHRA EAGYAASGAE ALVRWRHSQR GLLTPASFIP VAEEGGLIDA LGFWVLREAC
RAACKWPEDT FVAVNVSPAQ LRRPNFAEEV FAVLEESGLQ PSRLELELTE SSLIEDNSDV
YTVLKSLRSR GVQVSLDDFG TGFSCLSHLL RFDIDRIKID RSFVSQLGTK ANGAAIIGAI
VALSRNLGIS TTAEGVETDY QRDFLAALGC TDLQGYFFSK PVPIGELDSF RKAESAAGLL
TTARGAVA
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