Gene Rleg_6410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6410 
Symbol 
ID8016909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp122739 
End bp123779 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content62% 
IMG OID644828205 
Productinner-membrane translocator 
Protein accessionYP_002979405 
Protein GI241554192 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000197566 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.503091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCA TTGAATCCAC GGCCCTGGAG CCGACCAAGA GCGAAATGGC CGGTCTGTCC 
ACAGGACAGA AGATCGGACG CCTGATCCCG GTTTACGGGC TGGTGATCCT GACCGTCGGC
CTGATCGTGA TCTTCTCGAT CCTTCTGCCG GATACTTTCC CGACCGTGTT GAATGTCCGC
TCGATCGTGT CCGACAAGGC TATCATCGCG CTTCTGTCGC TGGCTGCGAT GATCCCGATG
GCATCGGGTC GCATCGATCT GACCGTCGGC TATGGCATCG TGCTTTGGCA CATTCTCGCC
ATCAGCCTGC AGACGGCCTA CGGCCTGCCC TGGCCGGTCG CGGTCGTCAT CGTGCTCGCA
CTCGGTGTTC TGACCGGCTG CATCAACGGC CTGCTGGTCG AGGTTGCGAA GATCGACAGC
TTCATCGCGA CGCTCGGCAC CGGAACGGTC CTATACGCGC TGGCCCTCTG GCACACCGGC
GGCCGACAGG TGGTCGGCGT CCTGCCTGAT GGTTTCTATG CGCTGAACGG CACCATGCTG
TTCGGCCTTC CGATCACCGG CTTCTATGTG CTGCTGATCG CCATCTGCAT GTGGATCGTG
CTCGAATACC TGCCGATCGG CCGCTATCTC TACGCCATCG GCGCCAATCC GAAGGCTGCA
GCCCTCAATG GCATTCCGGT CCGCAAATTC GTGATCGGCG CATTCGTCAC CTCGGGGCTG
CTCGCGGCCC TGACCGGGGT CCTGCTCGCC TCGAAGCTGC GCATCGGCCA GGCGAGCGTC
GGCCTCGAAT ATCTCCTGCC GGCGCTTGTC GGCGCGTTCC TCGGATCGAC GACGATCAAG
CCGGGACGGG TGAACGTCTG GGGCACCTTG ATCGGCGTCA TCATCCTGGC CGTTGGAATA
TCAGGAATTC AGCAATTCGG CGGGTCGTTC TTCGTCGAAC CGCTGTTCAA CGGCGTGACC
CTGCTGATTG CCATCGGCAT CGCAGGCTAC GCCCAGCGCA AGCGCGGAGC TGTGAGGAGG
ATCACACCCG CATCCAAATG A
 
Protein sequence
MQSIESTALE PTKSEMAGLS TGQKIGRLIP VYGLVILTVG LIVIFSILLP DTFPTVLNVR 
SIVSDKAIIA LLSLAAMIPM ASGRIDLTVG YGIVLWHILA ISLQTAYGLP WPVAVVIVLA
LGVLTGCING LLVEVAKIDS FIATLGTGTV LYALALWHTG GRQVVGVLPD GFYALNGTML
FGLPITGFYV LLIAICMWIV LEYLPIGRYL YAIGANPKAA ALNGIPVRKF VIGAFVTSGL
LAALTGVLLA SKLRIGQASV GLEYLLPALV GAFLGSTTIK PGRVNVWGTL IGVIILAVGI
SGIQQFGGSF FVEPLFNGVT LLIAIGIAGY AQRKRGAVRR ITPASK