Gene Rleg_6401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6401 
Symbol 
ID8017015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp111561 
End bp113036 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content62% 
IMG OID644828196 
ProductNa+/solute symporter 
Protein accessionYP_002979396 
Protein GI241554183 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.492605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.134599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTG ACATCAACGG CACGGCGCTT GCCGTCTTCA TCTTCTTTTT CGTACTCGTC 
ACCGTCATGG GCTTCGTTGC CTCTCGTTGG CGTAAGCCGG AAACGCTGGC GAGTATAGAC
GAATGGGGCC TCGGCGGACG CAACTTCGGC ACCTGGATCA CCTGGTTCCT GGTCGGCGGC
GATTTCTATA CCGCCTACAC CGTGATCGCC GTCCCGGCGC TGGTCTACAC GGTCGGCGCC
TACGGCTTCT TCGCGCTGCC CTACACCATC GTCGTCTATC CCTTCGTCTT CATGGTCATG
CCTGTGCTGT GGAAACGCGC CAAGGATTTC GGCTATGTGA CGGCTGGCGA CGTGGTCCAC
GGTCAATATG GATCGCGCGG GCTCGAACTT GCCGTGGCGG CAACAGGCGT CATCGCCACC
ATGCCCTATA TTGCCCTCCA GCTCGTCGGC ATGACGGCGG TGCTGAAGGC GCTCGGGCTG
CATGGCGAAT TGCCGCTGGC GATCGCCTTC ATCGTGCTGG CGCTCTACAC CTACTCCGCG
GGCCTGCGCG CACCGGCGCT GATTGCCTTC GTCAAGGACA TCATGATCTA TATCGTCGTG
ATCGCCGCCG TCGCACTGAT CCCGTCGAAA CTCGGAGGTT ACGCGAATGT CTTTGCCTCG
GCCGACGCGG CTTTCCAGGC CAAGGGTTCC GGCAACCTGC TGCTCGGCGG CAATCAGTAT
GTCGCCTATG CCACGCTCGC CTTGGGTTCG GCGCTCGCGG CCTTCATGTA TCCGCATACG
CTGACCGGCA TCTTTGCCTC CAACAGCGGC AAAACGATCC GCAAAAATGC GATCATGCTG
CCCGCCTATA CGCTGCTGCT CGGCCTTCTG GCGCTGCTCG GCTATATGGG GCATGCCGCC
AACCTGAAGC TCGACAGCGC CAATGACGTT GTTCCGACGC TGTTCAAGAC GCTGTTTTCA
GGCTGGTTCT CCGGCTTTGC CTTTGCGGCG ATCGCCATCG GTGCGCTGGT GCCGGCGGCA
GTGATGAGCA TCGGCGCCGC CAACCTCTTC ACCCGCAATT TCTGGAAAGC CTATGTCGAT
CCTGATGTCA GCGATGCGGG CGAGGCGAAG GTCGCAAAGA TCACCTCGCT CGTCGTGAAG
ATCGGGGCGC TTCTCGTCAT CATCTTCCTG CCGACGCAAT TCGCCCTCGA CCTGCAGCTG
CTCGGCGGCA TCTGGATCCT GCAGACGCTT CCGGCGCTGG TCTTCGGCCT CTATACCAAC
TGGTTCCGTG CACCCGCTCT GCTTGCCGGC TGGTTCGTCG GCTTCGGCGG CGGCACTTTC
CTCGTCTGGG ATGCCGGTTG GAAGCCTCTG CATCTGATCA GCCTCGGCGG CGAACCCTTC
ACCGTCTATA CCGGACTGCT GGCGCTTGCG GCCAACATCG CCGTTGCGGT CGTGGTCAAC
GCCTTGCTTC CGGCCAAGGC TCCGGCCCGG GCATAA
 
Protein sequence
MTTDINGTAL AVFIFFFVLV TVMGFVASRW RKPETLASID EWGLGGRNFG TWITWFLVGG 
DFYTAYTVIA VPALVYTVGA YGFFALPYTI VVYPFVFMVM PVLWKRAKDF GYVTAGDVVH
GQYGSRGLEL AVAATGVIAT MPYIALQLVG MTAVLKALGL HGELPLAIAF IVLALYTYSA
GLRAPALIAF VKDIMIYIVV IAAVALIPSK LGGYANVFAS ADAAFQAKGS GNLLLGGNQY
VAYATLALGS ALAAFMYPHT LTGIFASNSG KTIRKNAIML PAYTLLLGLL ALLGYMGHAA
NLKLDSANDV VPTLFKTLFS GWFSGFAFAA IAIGALVPAA VMSIGAANLF TRNFWKAYVD
PDVSDAGEAK VAKITSLVVK IGALLVIIFL PTQFALDLQL LGGIWILQTL PALVFGLYTN
WFRAPALLAG WFVGFGGGTF LVWDAGWKPL HLISLGGEPF TVYTGLLALA ANIAVAVVVN
ALLPAKAPAR A