Gene Rleg_6398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6398 
Symbol 
ID8017012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp109076 
End bp110461 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content61% 
IMG OID644828193 
Producthistidine kinase 
Protein accessionYP_002979393 
Protein GI241554180 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.176497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGTTAC GACACCAGAT CATCGCATTG GCGATCGTCC CGCTCGTCAT ATCGATCCTT 
GCGATCACCA CCTTCATCAC CTGGCAATCG GCAAACCTCG CCAAGAACAG CATCGACACG
TTCGAGCAGA ACATGCTGAA GACCAAGGAA GCCGAGATCC TCAATCTGAC CAACCTTGCC
CTGTCCGCCA TCCAGACGAT CTATGACAAT GCCGGTGCCG ACGACGAAGC CGCCAAGCAA
AAGGTGGCGG CGATCCTGAC TTCGCTCGAC TACGGCAAGG ACGGATATTT CTTTGTCTAC
GATTATGACG GCAACAACAT CGTCCATCCG CGCCAGAGTT TCCGGCATGG GCATAATTGG
CTCGATCTTA CCGATCCGGA TGGCGACAAG GTCATTGCCG AACTGATCGC CACGGCAAGA
GCGGGCGGGG GCCTGCATCA GTACAAATGG CAGAAACCAT CGACCGGACA GATCGCAGAC
AAGCTCTCCT TCGTCGTCAG TCTCGACAAA TGGCAATGGG TCGTCGGCAC CGGTGTTTAT
CTGGATGACG TCTTTGCCCA AAGCGCCGCC GCCAACGCCG GCATGCGCGC CAACATAAAA
CGGACCTTTA TCATCGTCGC GCTGATCGCC GTGCCTTCGG TGCTCGTCGT TTTCACCACC
TGCATGCTGC TGACGTTCCA CGAGCGCCGC ATGGCCGACA GCCGGCTCAA GGCCCTTACG
CAGCGGGTCA TCGATACCCA GGAAGAAGAG CGCGCACGGC TGGCGCGCGA GTTGCACGAC
GGCATTTCCC AAAATCTCGT CGGCGTGCGC TATGCGATGG ATCTTGCCGG CCGCAAGGTG
AGGACCAATG TCGACGATGC AGCACTGACG ATCGATCGCG GTGTCGAGGC GCTGAACGGC
GCCATCAAGG AAATCAGGCG GCTGTCGCAC GACCTGCGCC CGCGCGTGCT CGACGACCTC
GGCCTGACGG CGGCGCTCGA GGCACTCTGC TATCACTTTG CCGAGCGGAC GGGCATCGAG
ACGAAGATCG ACGCCTCAAG CTTCACCGAC ACGCTGAAGG CCGAAGCCAA TACCGCGCTT
TATCGTGTCG CACAGGAAGC GTTCAACAAT GTCGAACGCC ACTCGGGCGC CTCCAAGCTT
GCGGTCAAGG TCTGGAGCGA CAACGGCCGC GCCCGCATGA CGGTCACCGA CAATGGCACT
GGCTTCGACG GCGCCAAGGA CGGCCTGTCC GGCAGATCGG GTCTCGGCCT GCGCAACATG
CAGGAGCGGA TGGCCCACTT CCGCGGCCTG CTGCTGATCA ACAGCAGCGA GACCGGCACG
ACGCTGACGG CAATGCTGCC GAAATCAGCC AATCGTCCCG CCGGCAAGCG GGCAGAAGCG
GCATGA
 
Protein sequence
MTLRHQIIAL AIVPLVISIL AITTFITWQS ANLAKNSIDT FEQNMLKTKE AEILNLTNLA 
LSAIQTIYDN AGADDEAAKQ KVAAILTSLD YGKDGYFFVY DYDGNNIVHP RQSFRHGHNW
LDLTDPDGDK VIAELIATAR AGGGLHQYKW QKPSTGQIAD KLSFVVSLDK WQWVVGTGVY
LDDVFAQSAA ANAGMRANIK RTFIIVALIA VPSVLVVFTT CMLLTFHERR MADSRLKALT
QRVIDTQEEE RARLARELHD GISQNLVGVR YAMDLAGRKV RTNVDDAALT IDRGVEALNG
AIKEIRRLSH DLRPRVLDDL GLTAALEALC YHFAERTGIE TKIDASSFTD TLKAEANTAL
YRVAQEAFNN VERHSGASKL AVKVWSDNGR ARMTVTDNGT GFDGAKDGLS GRSGLGLRNM
QERMAHFRGL LLINSSETGT TLTAMLPKSA NRPAGKRAEA A