Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6385 |
Symbol | |
ID | 8016999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | + |
Start bp | 96464 |
End bp | 97249 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644828180 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_002979380 |
Protein GI | 241554167 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.040112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0189266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGCAG TTCAGGACGA AGCAGCCGGT AAACGCGCCC GAGGGCTCGA CCGCGCCTTC GAGATCCTCG ATTTCCTGCG CCAGAAACGG CAGGCCCTGA AGCCGAATGA AATCGCCGCG CAGATCGGCG CGCCGCGCTC ATCGGTTTAC GAGCTCGTCA ACCTGCTGCT GCAGAATGGT ATCCTGGAAT TCACCGGCGG CGAGGGGCGT GTCTATCTCG GCCGCAAACT GTATTTCCTC GGCGCAGCCT ATGAGAACCA TTTCGACTTC ACCCGCGAAT GCGAGGCGGC GCTGGAACAG CTTGCCGACG AGACGCGGGA GACAGCGCAG TTCTGCATGC TGGATGGAAA CAGATACACG GTCGTTCGCA TGCGCGAAGG CGCGCGCCCC TTCCGCATTT CGACGGATGT CGGGCAGTCG GTGCCGATCC CGTGGACGGC GTCGGGCCGC CTGCTCGTCG CACACCTGTC GGATCAGGAC ATTCTTAACT TCATTCCGCC GCAGGATTTT CGCCTGCCGA ACGGCGAATG GCTTGAGCCG CAAACCTTCA TCGCCGAGGT GCGCCAGGCC GAGCGCGAAG GTCTCTTCAC CTTCAACAGC ATCGTCGACA GCTTCACCCA CTGTTTTGCC GTACCGGTGC GGGGCGAGGA AGGCCATGCA GCCGCAACGC TCTGCCTCGT CACGCCACGC GACGATGGCA TCGCCAACCG GGACCGCTAC CTCGACTGCC TGAAGAAGGC CGCCGCCGGC CTCGACCATG CCCCGACCCG GCCAAAACGA GGCTGA
|
Protein sequence | MDAVQDEAAG KRARGLDRAF EILDFLRQKR QALKPNEIAA QIGAPRSSVY ELVNLLLQNG ILEFTGGEGR VYLGRKLYFL GAAYENHFDF TRECEAALEQ LADETRETAQ FCMLDGNRYT VVRMREGARP FRISTDVGQS VPIPWTASGR LLVAHLSDQD ILNFIPPQDF RLPNGEWLEP QTFIAEVRQA EREGLFTFNS IVDSFTHCFA VPVRGEEGHA AATLCLVTPR DDGIANRDRY LDCLKKAAAG LDHAPTRPKR G
|
| |