| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6382 |
|---|
| Symbol | |
|---|
| ID | 8016996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012854 |
|---|
| Strand | - |
|---|
| Start bp | 92663 |
|---|
| End bp | 93625 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644828177 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002979377 |
|---|
| Protein GI | 241554164 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.079038 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAA GTTCATCATC CCGGCTCTAC GGCTCGATCC AGCTTCGCCG CAACCGTGGC
CTTGCCGGCC TCTATCTGGT TGTCGCCGCC TTTCTCATCC TCTATGCGCT GCTCTTTCCC
GGCATCCTTT CGATCGGCGG CTTCTCCAAG TTCACGCAGA ACTGGTTCCC GCTGGCGCTC
GTCACCATGG CGCAGGCGCT GCTCATGCTG AACGGCGGCA TCACGCTCGC AATCGGCCCG
CTCGTCAGCC TTGGAGCGGT GATCGCCGCG ACGACGATGC AAGGGGCGCT CGGCGTGCCG
GGCGGCATTC TTGCGGTCGC ACTCGCCGGT CTTTTGATCG GCGCCGCCAT CGGCGTCATC
GTTACCTATC TGAGGCTGCC TGCAATCATT GTCACGCTCG CCGGCTCCTT CATCATCGGC
GGGGTCGCAC TCATCCTGCT GCCGCGGCCG GGTGGGTTCA TTCCCGATTG GCTGTCGACG
GTACTGGCCG GCCACACGCC CGTCGCCTTC CTGCTGCTCG TCGTGATCCT GGTACTGTGG
AAGGCCTTTC TTGCAACGCC GCTCGGCCTC GGCATCTACG CGGCCGGCGA CAATCCGGTC
GGCGCGTTCC GCTCCGGCGT CCCGGTTGAA CGGGTGAAGG TCGCAGCCTT CGCGCTGTCC
GGTCTTCTCG CCGCCCTGAC CGGTCTCTTC GTCGCTGCGC AGACCGGCTC GGGTGATCCT
GTTATCGGCA CGCCCTTCAC GCTGAACTCG ATTGCCGCCG CCGTGCTCGG CGGCGTGGGC
TTCCTCGGCG GCAAGGGCAC GATGCGCGGC GCGATCTGCG GCAGCCTGCT GCTCTCGGTG
ATGATCAACG TCATGTTCTT CCTGGGCTTC CCGCCGGTCG CACAATATGT CGCGCAAGGT
CTGATCATCG TCGGCGCGGT CGCCGTGCCG GAACTTCTTG GGGCTTGGAG GGCAAGGCGA
TGA
|
|---|
| Protein sequence | MSTSSSSRLY GSIQLRRNRG LAGLYLVVAA FLILYALLFP GILSIGGFSK FTQNWFPLAL
VTMAQALLML NGGITLAIGP LVSLGAVIAA TTMQGALGVP GGILAVALAG LLIGAAIGVI
VTYLRLPAII VTLAGSFIIG GVALILLPRP GGFIPDWLST VLAGHTPVAF LLLVVILVLW
KAFLATPLGL GIYAAGDNPV GAFRSGVPVE RVKVAAFALS GLLAALTGLF VAAQTGSGDP
VIGTPFTLNS IAAAVLGGVG FLGGKGTMRG AICGSLLLSV MINVMFFLGF PPVAQYVAQG
LIIVGAVAVP ELLGAWRARR
|
|---|
| |