Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6369 |
Symbol | |
ID | 8016983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | - |
Start bp | 80888 |
End bp | 81793 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644828164 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002979364 |
Protein GI | 241554151 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.120934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCA GACGCCTCAA ATCTTTCATC GTGATCGTCG ACAGCGGCAG CATCACGCGA GCGGCGGACC TTTTGCACAT CGCCCAGCCG GCCCTCAGCC AGCAGCTTGC GGCACTGGAG GAGCATTTCG GCCACAAGCT GCTGATCCGC AGCCAGCAGG GCGTCAGCAT GACCGACGCG GGACACGCGG TGTATCGCCA TGCGCAGATT ATCCTTCGGC AGATGGAGCA GGCGCAAGCG GATGCCTCCG CAGCCGGGAA TTCGCTTGCC GGGCGTGTGT CCGTCGGTCT CGTGCCGTTC AGCAGTGCGG CCACGCTGTC GGTCGACCTC CTGGCGGAGA CCCGCAAACG GCATCCCGGT ATTCTGCTGC ACCTGACGGA AAGCGTCGGC CAGACCTATA GCCAGATGAT CATGAACGGC CGGCTGGAGA TGGCGCTTCT CCATGGAACC GGACCGATCA AGGGCGTCCG GTTCGAGCCG ATTCTGAGCG AAGAGTTTTT CCTTGTCGCC CATCGGGACT TTGCGATCGA GGCGGATGCG AAACCGGTTC CGGTCAATAG TCTCGACGGG ATGCCGCTGC TGTTGCCGCC GGCCTATAAT TTCGTGCGCC GCGCGGTCGA TACCGCCTTC ACGCGCACCC GCACCAATTT GAAAGTCGTG GCGGAAGTCG AAATCGTCCG CACGCTCGCC CGCGCGGTGG GCAGCGGTCT CGGCGCGACG ATCATGCCCA AAGCCATCGC CGACCGCATC GTATCGGAAT CGAGCGAGCC GCTGATCTGC CGGCTCGTCT CGCCGCGGAT CGAAGAAACC CTGTCGCTGT GTGTGTCCGA TCAGAATCCC TTGTCCGAAC CGGCCCTTGC CGTCCGCGAC ATCCTTCTCG AGCTGACGGC GCGGTTGAAA CGCTAG
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Protein sequence | MDIRRLKSFI VIVDSGSITR AADLLHIAQP ALSQQLAALE EHFGHKLLIR SQQGVSMTDA GHAVYRHAQI ILRQMEQAQA DASAAGNSLA GRVSVGLVPF SSAATLSVDL LAETRKRHPG ILLHLTESVG QTYSQMIMNG RLEMALLHGT GPIKGVRFEP ILSEEFFLVA HRDFAIEADA KPVPVNSLDG MPLLLPPAYN FVRRAVDTAF TRTRTNLKVV AEVEIVRTLA RAVGSGLGAT IMPKAIADRI VSESSEPLIC RLVSPRIEET LSLCVSDQNP LSEPALAVRD ILLELTARLK R
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