| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6358 |
|---|
| Symbol | |
|---|
| ID | 8016972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012854 |
|---|
| Strand | - |
|---|
| Start bp | 71599 |
|---|
| End bp | 72549 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644828153 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_002979353 |
|---|
| Protein GI | 241554140 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACTG ACAGGCTGCG CTTCGGTGTC GATCTCGTGA CATTCTTTCA TCCCGGCTTC
TGGGGCGTCG ACAGCCATGA GGCGATCGTC GGCTACGCCC GCGCCGAGCC CCGTGACTTC
TGGGACAAGA TACTCGACAG CGTCCAGGCC TCCGGCGTTG CCGGTGTCGA GCTGACGTTC
TCTCCCTTCA ACTGGCAGGA CGCCATCAAG ACCTATGGTT CCGTCGACGC CTTTGCAGCC
GAACTGGCAA GACGCGGCCT GACGCTGTGC AGTGGCTTCT TCGCGGAACT GGAGGCGGCC
GGCGATTTCG CTGAGCCCGA GGCCCAGCGC GCGCTGATCG ACAAGGCGGA ACGATATGCC
GACTTCCTGA AAGCCTGCGG CAGCGACATC ATGGTGATCG GCGCGCCGCT GCGCCAGACG
CTCGGCGCCC AGCCGGTGCA ATTCCATGAT TTCGACCGCG CCAAGGTGAT CGCCGATTTT
CTGAACCGGC TTGGTGCGAC CCTCTATGCC AGGGGCGTGC GGCTGGCGCT GCACACCGAG
GCGCACTCGA TCTTTGCCGC CGCGCGCGAC GTCGATCTGA TGATGCTTTT GACCGACCCG
GCCTACGTGC ACATGTGCCC GGACACGGCC CATATCATCG TTGCCGGCTC CGATCCCGTC
CAACTCGTCG ATCGCCATCA CGAGCGCATG ATCATCGCTC ACTGGAAGGA TGCGATCGGC
CCGATGCCCG CCGATACGCC GATCGACAAG CACATCCATG AACGCCACCA GCCCTATTTC
TGCAGCTTCG GCCTCGGACG GGTCGACTGG CCATCCTGGA TCCGGCTGCT GCGCGACCGG
GCCTATGAAG GCTGGGCGAT CCTCGAACTC GATGCCGCGC CCGATCCCGT CCGCGACATC
GCCAACGGGC TCACGCTCGT CCGGCAGGCG CTCCTGCCGA TCTATCGCTG A
|
|---|
| Protein sequence | MATDRLRFGV DLVTFFHPGF WGVDSHEAIV GYARAEPRDF WDKILDSVQA SGVAGVELTF
SPFNWQDAIK TYGSVDAFAA ELARRGLTLC SGFFAELEAA GDFAEPEAQR ALIDKAERYA
DFLKACGSDI MVIGAPLRQT LGAQPVQFHD FDRAKVIADF LNRLGATLYA RGVRLALHTE
AHSIFAAARD VDLMMLLTDP AYVHMCPDTA HIIVAGSDPV QLVDRHHERM IIAHWKDAIG
PMPADTPIDK HIHERHQPYF CSFGLGRVDW PSWIRLLRDR AYEGWAILEL DAAPDPVRDI
ANGLTLVRQA LLPIYR
|
|---|
| |