| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6319 |
|---|
| Symbol | |
|---|
| ID | 8017048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012854 |
|---|
| Strand | + |
|---|
| Start bp | 35635 |
|---|
| End bp | 36393 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644828114 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IIB |
|---|
| Protein accession | YP_002979314 |
|---|
| Protein GI | 241554101 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1877] Trehalose-6-phosphatase |
|---|
| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.777067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGACG ATGCCGCTAC ACAGGAAATG CTTTCACTGG TCTTGGAGGA ACCGGACCGC
TGGGCAATGT TTCTCGATAT CGACGGAACG CTGCTCAATC TTGCACCCAC ACCGGATGCG
ATAGAGGTTC CAGAGGCGCT TCCTGGACAA CTTCATCGCC TGTCGAACAA GCTCGGCGGC
GCCTTGGCGC TGGTCACCGG ACGGTCTCTT GCTTATGCAG ACGCGCTGTT CAAACCCTTT
GCATTTCCGA CAGCAGGCCT GCACGGCGCC GAAATCAGGA ACGCCGCCGG AATGCAGACG
GTCGAGGCGA CACCTGAGTT TCAGGCGTTG AAACATGCGC TGACCGCTGA AGCCGAGCAC
TACCCTGGCG TCCTGATCGA GGACAAGGGC GCGGCCGTTG CCGCCCACTA CCGGCTGGCG
CCGGAATATG AAAAGGTGCT CGAAGACCGC ATGCACCACT ATGCGGAGCT CGCCGGGCCG
AACTGGGCAT TGCAGCTCGG CAAGATGGTA TTCGAGCTGC GCCCGGCACG GTCGAGCAAG
GGCGATGCGC TGGAGCGGTT CTTCCAGTCC GACCCGTTCA AGAACCGCTC GCCGATTACC
ATTGGCGATG ATCTGACCGA CGAGTCGATG TTTGCGATCG CCAATGCGCG TGGTGGCGTT
TCCGTGCGTG TCGGCGCGAT CGGCGCTCCC AGCTGCGCCA CGAGCCGGCT GTCCTCTTCT
GCGCTGGTCA GAAACGTGAT TGCCGCCTTG GCCGCCTGA
|
|---|
| Protein sequence | MQDDAATQEM LSLVLEEPDR WAMFLDIDGT LLNLAPTPDA IEVPEALPGQ LHRLSNKLGG
ALALVTGRSL AYADALFKPF AFPTAGLHGA EIRNAAGMQT VEATPEFQAL KHALTAEAEH
YPGVLIEDKG AAVAAHYRLA PEYEKVLEDR MHHYAELAGP NWALQLGKMV FELRPARSSK
GDALERFFQS DPFKNRSPIT IGDDLTDESM FAIANARGGV SVRVGAIGAP SCATSRLSSS
ALVRNVIAAL AA
|
|---|
| |