Gene Rleg_5963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5963 
Symbol 
ID8016383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp507508 
End bp508569 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content54% 
IMG OID644828076 
Productprotein of unknown function UPF0118 
Protein accessionYP_002979276 
Protein GI241518648 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.97133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAT TTGGGACGGT GCTTCCGCGA TGGACAGCCA TTGGCCTCTT CATCTATGCA 
TCCATACTTT TTCTCAGCTT TGCCAGAGAA TTCCTCGTCC CGATCGTGCT CTCCTTTCTG
CTTGCCCTGG TTTTTAGCCC GATCAGACGC TTTCTCGATG AAAGGGGTGT GCCGTCGGTT
GCCACATCCC TGATCATCGT CGGGGCGCTG ATAGCGGCGC TTGCCATCAT TCTAGGTGCA
ATCATCGTGC CGGTGAGCGG CTATGTCGAA AGTTTGCCCA GGATAGAGCA AGCCATTCAG
GAAAAGCTTG CAGGGATGTC GCAGGCGCTA TCAGGACTGT TCGAGGCCAG CAGACGACTG
ACAGACTTTT TGAGGAGCCA TGCCGCAAAT GTTCAGCAGG TCGAGCTGCG TGGAAACGGA
CTGATCACCA GCGCTGCGCT TTTCGTTCCG GCGCTGATCG CGCAGACGCT ATTTACGCTG
GTTTTGTTGT TGTTTCTTCT GGCGTCGGGA GACATTCTTC ACGAGAGACT GGTTGAAATC
TTGCCAACGG TGCAAGACAA AAACCGGGCC GTCGAGATTT CGCACGATAT CGAGCGTAAA
CTTTCGCGTT ACCTGTTGAC CATCACGACA ATCAATGTGT GTCTCGGTGG CGTTATCGCG
GCTCTCCTTT GGCTGAGCGG GATGCCTAAC CCGTTGCTGT TTGGAGTGCT CGCGTTCATA
TGCAATTTCG TTCCTTATCT TGGACCTCTG GTAAGCATGA CGGCCGCCTG CGCCGTCGCC
CTGATTTCAT CGAGCGGCGT TGGGTTTGCG GTCGCGATCG CATCGCTTTA TCTCTTGGTC
ATGACGATCG AAGGCCAGAT CATAACACCC TACTTTATCG GCAGGCGACT GCGGTTGAAT
ACGGTGGTGG TTTTCGTAGC AATTTCTTTC TGGGCTTGGC TGTGGTCCAT TGTCGGCATG
CTGGTGGCGG TACCGCTCCT AGTCACGGTT AGCGTTTTTT GTGAGCACGT CGAAAGCCTG
CGCGGCCTTG GCAACTTGTT GTCCGCAAGG AATGACCGAT AA
 
Protein sequence
MSAFGTVLPR WTAIGLFIYA SILFLSFARE FLVPIVLSFL LALVFSPIRR FLDERGVPSV 
ATSLIIVGAL IAALAIILGA IIVPVSGYVE SLPRIEQAIQ EKLAGMSQAL SGLFEASRRL
TDFLRSHAAN VQQVELRGNG LITSAALFVP ALIAQTLFTL VLLLFLLASG DILHERLVEI
LPTVQDKNRA VEISHDIERK LSRYLLTITT INVCLGGVIA ALLWLSGMPN PLLFGVLAFI
CNFVPYLGPL VSMTAACAVA LISSSGVGFA VAIASLYLLV MTIEGQIITP YFIGRRLRLN
TVVVFVAISF WAWLWSIVGM LVAVPLLVTV SVFCEHVESL RGLGNLLSAR NDR