Gene Rleg_5941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5941 
Symbol 
ID8016361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp484669 
End bp485925 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content62% 
IMG OID644828054 
Productsodium/hydrogen exchanger 
Protein accessionYP_002979254 
Protein GI241518626 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.111352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCGTCT TCGATCTCAT CTCGCTGCTT CTGGTTCTCA CTGCCGGGTT CTCCTGGATC 
AACCATCGCT ATTTCAGGCT TCCCCCCTCG ATCGGGATCC TTGTGATGGG ACTTGCGGCG
TCGGCGTTGC TGGTCCTGCT GGAGCTTGCC ATTCCAAATG TCTCCATCTA CGCGGACGTC
GCAGCCCTCG TGCGACAGGT GGATTTCCAG ACTACCGTCA TGAATGGGCT TCTCGCCTTC
CTGCTGTTTG CTGGCTCGCT CCATGTCGAC TTTTCCGCCC TTCGGTCGCG AGTCGCAGTC
GTTGGAGCGA TGGCTACCAT CGGCGTGCTC CTATCAACGG TGCTCATCGG CGTGGCGATG
TGGGCCTTGG CGGCCCTGTT TGGCATAGAG CTGCCGTTCC TGTGGGCGCT GGTGTTCGGC
GCGCTGATCA GCCCCACCGA TCCCGTGGCG GTTCTCTCGA CGCTCAAGGC CGTAAAGGTC
CCGCAAGCGC TCGAGACGGA CATGGCGGGC GAGTCGCTAT TCAATGACGG CGTCGGCGTC
GTCGTGTTCA CCGCATTGCT CGCGCTGGCG AGCGGCGGCA CAGACGTCGG CGCGGCGCAG
GTCGCGGAAC TCTTCGTCGT CGAGGCACTG GGAGGGGCAG TGATCGGCCT GCTATCAGGT
TACGTTGCCT ACTTGGCGAT GAGGGCGATC GACGACTATC CCGTCGAGGT GTTGATATCC
ATTGCGCTGG CGATGGGTTG CTATTCCCTC GCCTCTGCAC TGCATATGAG CGGCCCGATC
GCCGTCGTGG TCGCCGGAAT CCTCGTTGGC AACCGTGGAC CGAGGGACGC GCTCAGCGAC
GTGACGCAGC GATATCTCTT CGGCTTCTGG ACATTGGTCG ACCAGATCCT AAATTCGGTG
CTCTTTCTCC TTATCGGGCT TGAGGTTCTT GTTCTCCGCT ACGAGACGTC AATCCTGCCG
CTCGCCCTCG CCGCCATACC CGTGGCGCTC GCGGCCCGCT TCGCGTCGAC CATCATCCCC
GTGACCCTGC TCCGCAGAAA CTACGACTTC GTCCGCGGCA CGGTAATCGT CCTCGTCTGG
GGAGGTCTCA GGGGCGGCAT ATCGATCGCC TTGGCACTGT CCCTTCCGGA AACGCCCTTC
AAGGCGGCTC TGCTTGCCGC CACTTATGCC GTCGTGATCT TCACGATCGT GGTTCAGGGA
CTGACACTGG GAAAAGTCGC CAGCCGCTCA TTGCGGGCGT CCGGCCCTTC AATGTAG
 
Protein sequence
MSVFDLISLL LVLTAGFSWI NHRYFRLPPS IGILVMGLAA SALLVLLELA IPNVSIYADV 
AALVRQVDFQ TTVMNGLLAF LLFAGSLHVD FSALRSRVAV VGAMATIGVL LSTVLIGVAM
WALAALFGIE LPFLWALVFG ALISPTDPVA VLSTLKAVKV PQALETDMAG ESLFNDGVGV
VVFTALLALA SGGTDVGAAQ VAELFVVEAL GGAVIGLLSG YVAYLAMRAI DDYPVEVLIS
IALAMGCYSL ASALHMSGPI AVVVAGILVG NRGPRDALSD VTQRYLFGFW TLVDQILNSV
LFLLIGLEVL VLRYETSILP LALAAIPVAL AARFASTIIP VTLLRRNYDF VRGTVIVLVW
GGLRGGISIA LALSLPETPF KAALLAATYA VVIFTIVVQG LTLGKVASRS LRASGPSM