Gene Rleg_5893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5893 
Symbol 
ID8016528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp447171 
End bp448568 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content57% 
IMG OID644828010 
Productsignal transduction histidine kinase 
Protein accessionYP_002979210 
Protein GI241518582 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTC AGAAGCAACA TACGCGAGTC GATCCAGCCG ACTTGGGTGG CGAGATCTAT 
CGGCATATTA TCGAAAGCGC CACCGAGTAC GCCGTGATCG CGACCGCCCT CGATGGCACC
ATCACCACAT GGAGTGCCGG CGCCAGCAAT CTTCTTGGCT ACACGGCGGA GGAAGCGGTA
GGACAAAACC TCGCCATGAT TTTTTCGTTC GAGGATCAGT TGCAGGGCGT TTTCCATGCG
GAAATTCGCG GTGCCACGCA AAATGGCCGT GCCGACGACA ATCGCTGGCA TATTCGCAGG
GATGGCAGCC GCTTTTGGGC GTCCGGCCTT CTTATGCCTC TAAGGGACGA CAATCAGGTC
ACGGTTGGCT TTGTCAAGAT TTTGCGTGAT CGCACTCAGT TCCTCGAACA GGACGAAACC
GTGCGCTCCA GCGAGGAGCG GCTGCAACTG ATTCTGGAGA GCGCAACTGA CTACGCGATC
TTCACCCTCG ACGATGAAGG CGCCCTGTTG ACCTGGAATG CCGGCGCGCA CCGCATTCTG
GGCTACGAGC GTGATGAGAT CATCGGGCGG GACGCCCGGA TCCTGTTCAC GCCTGAGGAA
CGACAGGCAG GCGCGCTCGA ATGGGAAATG GAAACTGCAA ACAAGGAAGG CCGAGGCGAA
AACGAACGCT TCCACGTTCG CAAGGACGGC TCCCGGTTCT GGGGCAGCGG CTTGACGATG
CCGCTCAAGG CGCGGCACGA CAAGATCGGC TATCTCAAGA TCATGCGGGA TGACACCGAA
CGGCATCTCG CCGAGGAACA TCAGCAGGTG ATGATGCGGG AAATGAGCCA TCGCGTAAAG
AACAGCCTGA TGCTGGTAAC CGCAATGCTT TCCATGCAAG CCAGGGCAAC CGATATTCCT
GATGTCAGGC GGGTTTTGAC GGATGCGGAA ACCCGGGTGG CGACCATTGC AGCCGTCCAT
GACCATTTGT GGCGGCAGCC TGATCTCGAG ACCATCGACC TAGCCGCGTT TCTTAAGGAT
CTTTGTAGCC GTCTAGCGCA AACATCTATC CGGCACACAC TCTCTTTTGA AGGCACTCCC
TGCCGGATAG ACACTGACCG CGCCATCCAG GCAGCCCTTC TTGTCAACGA GCTTGTGACG
AACGCGATCA AGCATGCCTA CCCATCAGGA GGCGGCAGAG TTGCCGTCTC GATCAACGCC
ATCGACGCCG TGATCTCCCT CACCGTTTCG GATGAGGGCG TCGGATTGCC AGACGACTTC
GATCCGCACG AAAGCTCAGG AAGGAGCCTT GGAATGAGGG TCGTCAAAGG GTTGGTAAGA
CAGCTCCAGG CAGAGTTTAT CGTAACGCGA ACTGAGCCAG GAACTGCGTT GATCACGAAA
ATTCCGTTGA GTTCGTGA
 
Protein sequence
MTLQKQHTRV DPADLGGEIY RHIIESATEY AVIATALDGT ITTWSAGASN LLGYTAEEAV 
GQNLAMIFSF EDQLQGVFHA EIRGATQNGR ADDNRWHIRR DGSRFWASGL LMPLRDDNQV
TVGFVKILRD RTQFLEQDET VRSSEERLQL ILESATDYAI FTLDDEGALL TWNAGAHRIL
GYERDEIIGR DARILFTPEE RQAGALEWEM ETANKEGRGE NERFHVRKDG SRFWGSGLTM
PLKARHDKIG YLKIMRDDTE RHLAEEHQQV MMREMSHRVK NSLMLVTAML SMQARATDIP
DVRRVLTDAE TRVATIAAVH DHLWRQPDLE TIDLAAFLKD LCSRLAQTSI RHTLSFEGTP
CRIDTDRAIQ AALLVNELVT NAIKHAYPSG GGRVAVSINA IDAVISLTVS DEGVGLPDDF
DPHESSGRSL GMRVVKGLVR QLQAEFIVTR TEPGTALITK IPLSS