Gene Rleg_5820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5820 
Symbol 
ID8016618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp393068 
End bp393595 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content58% 
IMG OID644827952 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002979152 
Protein GI241518524 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAC TGGGTGGAAC GGGTGCGGAG ATCAAAAAGG AAATCGTTGC GTTAATGCCG 
GCGGTGCACC GGTTCGCGAT GCGGTTCGAA CGATCTGTGA CAGATGCGGA CGATCTCACG
CAGGATACCA TGCTCAAGGC GCTCGCTCAC ATTGATCAAT TTCGGCCCGG GACCAACGTA
AAATCCTGGT TGTTCACGAT TGCCCGCAAC ACCTATTGCA CGAAATACAA GATCCGCCAG
AGATTTACCC TCTGTGCGGA CATGGAAGTC GCTACATCCG GGCAGGCGGT ACAATCGACC
CAGGAATGGT CTTTGCGCAC GGGGGAAGTC GATAAAGCCA TTTCAGCTCT CGACGCCGAC
AAGCGCCAGG TGTTGCTGAT GGCGGCAAAT GGCGACAGCT ACGAGGATAT CGCCGGGGTG
TGCGGGTGCG AACTCGGCAC GATCAAAAGC CGTATCTCGC GTGCAAGGGC CGCCGTAATT
TCGGCGCTCG GTGAAACCAC CGCGTCAGGA GCCGTCGCTG CAAGGTGA
 
Protein sequence
MSGLGGTGAE IKKEIVALMP AVHRFAMRFE RSVTDADDLT QDTMLKALAH IDQFRPGTNV 
KSWLFTIARN TYCTKYKIRQ RFTLCADMEV ATSGQAVQST QEWSLRTGEV DKAISALDAD
KRQVLLMAAN GDSYEDIAGV CGCELGTIKS RISRARAAVI SALGETTASG AVAAR