Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5820 |
Symbol | |
ID | 8016618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | + |
Start bp | 393068 |
End bp | 393595 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644827952 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002979152 |
Protein GI | 241518524 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGAC TGGGTGGAAC GGGTGCGGAG ATCAAAAAGG AAATCGTTGC GTTAATGCCG GCGGTGCACC GGTTCGCGAT GCGGTTCGAA CGATCTGTGA CAGATGCGGA CGATCTCACG CAGGATACCA TGCTCAAGGC GCTCGCTCAC ATTGATCAAT TTCGGCCCGG GACCAACGTA AAATCCTGGT TGTTCACGAT TGCCCGCAAC ACCTATTGCA CGAAATACAA GATCCGCCAG AGATTTACCC TCTGTGCGGA CATGGAAGTC GCTACATCCG GGCAGGCGGT ACAATCGACC CAGGAATGGT CTTTGCGCAC GGGGGAAGTC GATAAAGCCA TTTCAGCTCT CGACGCCGAC AAGCGCCAGG TGTTGCTGAT GGCGGCAAAT GGCGACAGCT ACGAGGATAT CGCCGGGGTG TGCGGGTGCG AACTCGGCAC GATCAAAAGC CGTATCTCGC GTGCAAGGGC CGCCGTAATT TCGGCGCTCG GTGAAACCAC CGCGTCAGGA GCCGTCGCTG CAAGGTGA
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Protein sequence | MSGLGGTGAE IKKEIVALMP AVHRFAMRFE RSVTDADDLT QDTMLKALAH IDQFRPGTNV KSWLFTIARN TYCTKYKIRQ RFTLCADMEV ATSGQAVQST QEWSLRTGEV DKAISALDAD KRQVLLMAAN GDSYEDIAGV CGCELGTIKS RISRARAAVI SALGETTASG AVAAR
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