Gene Rleg_5700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5700 
Symbol 
ID8016663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp283985 
End bp285133 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content58% 
IMG OID644827853 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002979053 
Protein GI241518425 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.857901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.376406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTAT CCGGATTTCG TATAACCCGA TTTCAATTCG CCCGCGACAG GGTAATCGGC 
GACAGTCAGG TCCGTGCAGA TGACGTCAAC GTGGCCGCTC TCGAACTTAT CGGCGAAACC
GGAAAGGTTG GGCTCGGCTT TATTCAAACG CTCTTTCATC CCCTGCCGGA TCAAGCAGAG
ATCGAAGCCG TGTTCAAGCA TGAAGCATGG CCCGCGATCG CGGGGCAAGA AGCGATCGGG
CTGGTCCATC GCGTCAACCG CCCGCGAGGC GGCAATCAGC GGGCTTTCTC GCTGCCGTTT
CACGAAGCTC TTCAGGTCGC ATTGTGGGAC CTGGCGGCCA AGGAAGTGGG ATTGCCTTTG
CATAAGCTGC TCGGAAGCCG CCGTGACCGG GTCCGCGCCT ATGCCAGCGG TCTAGACTTT
CATCTCAGCG ACGAGGCATT CCGCGCGCTG TTCTCGCACG CCGCCGCCCT CGGCTACCAG
GCATTCAAGA TCAAGGTCGG TCATCCCGAC TTCCGGCGGG ACATGCGCCG GCTCGACCTG
CTCAAAGAGG TCGTCCCCGC CGGGTCGCAG ATTATGATCG ACCCGAATGA AGCCTGGAAT
TCCAAGGAGG CGCTCGTCAA ATTGACGGCG ATCCGCGATG CGGGCCATGA CCTGCTGTGG
GTAGAGGATC CAATTCTTCG CCATGACTTC GAGGGCTTGC GTACGCTCCG TCACGCCGTG
AACTGGACGC AGATCAACAG CGGAGAGTAT CTGGATGCCA GTGGAAAGCG TCTTCTCATG
GAGAACTTCG CAACCGATCT GCTCAATGTT CATGGCCAGG TCACGGACGT CATGCGCATC
GGATGGCTGG CTGCCGAGCT TGGCATTCCG GTTTGCTTGG GAAATACGTT CCTGGAAGTA
GGCGTCCACA TGGCCGTCGC ACTCCCGGAA GTCGAGTGGC TCGAATACTC GTTCCAGAAT
TTTGATCACC TTGTGGAGCA GCCGATCCTA ATTCGCGATG GATTCGCCTA TGCTCCCGAT
CGGCCAGGCC ATGGTCTTGT TCTTAGCGAA GTATCACGTG AGCAGTGGTC GCGCCCGAAG
CGACTAATTG GTTCGGAACT TGGTGAACCA CCTGAAAATT CACGCCTTCC TCGTTTGAAT
GGAATGTGA
 
Protein sequence
MPLSGFRITR FQFARDRVIG DSQVRADDVN VAALELIGET GKVGLGFIQT LFHPLPDQAE 
IEAVFKHEAW PAIAGQEAIG LVHRVNRPRG GNQRAFSLPF HEALQVALWD LAAKEVGLPL
HKLLGSRRDR VRAYASGLDF HLSDEAFRAL FSHAAALGYQ AFKIKVGHPD FRRDMRRLDL
LKEVVPAGSQ IMIDPNEAWN SKEALVKLTA IRDAGHDLLW VEDPILRHDF EGLRTLRHAV
NWTQINSGEY LDASGKRLLM ENFATDLLNV HGQVTDVMRI GWLAAELGIP VCLGNTFLEV
GVHMAVALPE VEWLEYSFQN FDHLVEQPIL IRDGFAYAPD RPGHGLVLSE VSREQWSRPK
RLIGSELGEP PENSRLPRLN GM