Gene Rleg_5693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5693 
Symbol 
ID8016656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp277212 
End bp278222 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content58% 
IMG OID644827846 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002979046 
Protein GI241518418 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.114959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATC AGACCTATAC GCTTAAGCAA TTGGCACAGG GGCATCGACC GATCCGGATC 
GGCTTTTTCC TGGTGCCGGA CTTCCCTCTG ATGACCTTTG CAGCGGCGCT CGACTCGTTG
CGGCAGGGCA ATCGTCTGGC CAAGCGAAAG GCCTTTGAGT GGCTCATCCT GTCGGCGGAT
GGCGGCCATG TGAAGTCCAG CAGCGGACTA GGCTTCGATG CAGATGCGGC AATCGGCAGG
GCGCCGCGCT GCGATATCGT CATCCTCTGC GCAGGCATCA ATTATGCCGA TGCCTATGAT
GCCAATGTCT TTGCATGGTT GAGGCGCATC CATTCGGAGG GGTGCGTGCT TGGAGCAGTC
AGCACTGCGG TCTTCTTCCT GGCAAAGGCG CGATTATTGG AAGGGCGACG ATGTGCCGTT
CATTGGGAGT CGCTTGCAAG CTTTCGCAGC GAGTTTCCGA ACTGTCTCGC CACCGACGAC
ATTTTCGCGA TCGACGGACG TTTTCTGACC TCGTCGGGCG GAACGGTTAC ATTGGACATG
ATGCTTTACC TCATCTCTGC AGTGGAGGGT CGGGAGTTGG CAGCACTCAT CTCGGACCAG
TTCAACCACG CGCGGATACG GCGCCAGGAT GACGTTCAGA GGATGTCGCC CGAAGATCGT
TTCGGCATCC GGAACGCCAA GCTCGCCTTC GTTGTTCGTC GGATGGAAGC CAGCCTCGGC
GATCCGGTCG AAATTTCCGA TCTCGCCAGT AGCGTGGCGC TTTCGCTTCG ACAGCTCGAG
CGGCTGTTTC ACGCCAACCT CGGCAAGAGT CCTACCAATT TCTACATAGA GCTTCGCATG
ACACGCGCGA AAGAACTGCT GGTCTACACG GAATTGGCGA TCGGTGAGAT CGCCGAAATC
TGCGGTTATC AGTCGGCTTC GCATTTCGGC CGTTCATACC GCACGCGGTT TCGCGAGAGC
CCTGCCGCGA CTCGAAAGGC GGAGAAACGG CGAGAGGAGC CAATGTCATG A
 
Protein sequence
MTDQTYTLKQ LAQGHRPIRI GFFLVPDFPL MTFAAALDSL RQGNRLAKRK AFEWLILSAD 
GGHVKSSSGL GFDADAAIGR APRCDIVILC AGINYADAYD ANVFAWLRRI HSEGCVLGAV
STAVFFLAKA RLLEGRRCAV HWESLASFRS EFPNCLATDD IFAIDGRFLT SSGGTVTLDM
MLYLISAVEG RELAALISDQ FNHARIRRQD DVQRMSPEDR FGIRNAKLAF VVRRMEASLG
DPVEISDLAS SVALSLRQLE RLFHANLGKS PTNFYIELRM TRAKELLVYT ELAIGEIAEI
CGYQSASHFG RSYRTRFRES PAATRKAEKR REEPMS