Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5693 |
Symbol | |
ID | 8016656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 277212 |
End bp | 278222 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644827846 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002979046 |
Protein GI | 241518418 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.114959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGATC AGACCTATAC GCTTAAGCAA TTGGCACAGG GGCATCGACC GATCCGGATC GGCTTTTTCC TGGTGCCGGA CTTCCCTCTG ATGACCTTTG CAGCGGCGCT CGACTCGTTG CGGCAGGGCA ATCGTCTGGC CAAGCGAAAG GCCTTTGAGT GGCTCATCCT GTCGGCGGAT GGCGGCCATG TGAAGTCCAG CAGCGGACTA GGCTTCGATG CAGATGCGGC AATCGGCAGG GCGCCGCGCT GCGATATCGT CATCCTCTGC GCAGGCATCA ATTATGCCGA TGCCTATGAT GCCAATGTCT TTGCATGGTT GAGGCGCATC CATTCGGAGG GGTGCGTGCT TGGAGCAGTC AGCACTGCGG TCTTCTTCCT GGCAAAGGCG CGATTATTGG AAGGGCGACG ATGTGCCGTT CATTGGGAGT CGCTTGCAAG CTTTCGCAGC GAGTTTCCGA ACTGTCTCGC CACCGACGAC ATTTTCGCGA TCGACGGACG TTTTCTGACC TCGTCGGGCG GAACGGTTAC ATTGGACATG ATGCTTTACC TCATCTCTGC AGTGGAGGGT CGGGAGTTGG CAGCACTCAT CTCGGACCAG TTCAACCACG CGCGGATACG GCGCCAGGAT GACGTTCAGA GGATGTCGCC CGAAGATCGT TTCGGCATCC GGAACGCCAA GCTCGCCTTC GTTGTTCGTC GGATGGAAGC CAGCCTCGGC GATCCGGTCG AAATTTCCGA TCTCGCCAGT AGCGTGGCGC TTTCGCTTCG ACAGCTCGAG CGGCTGTTTC ACGCCAACCT CGGCAAGAGT CCTACCAATT TCTACATAGA GCTTCGCATG ACACGCGCGA AAGAACTGCT GGTCTACACG GAATTGGCGA TCGGTGAGAT CGCCGAAATC TGCGGTTATC AGTCGGCTTC GCATTTCGGC CGTTCATACC GCACGCGGTT TCGCGAGAGC CCTGCCGCGA CTCGAAAGGC GGAGAAACGG CGAGAGGAGC CAATGTCATG A
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Protein sequence | MTDQTYTLKQ LAQGHRPIRI GFFLVPDFPL MTFAAALDSL RQGNRLAKRK AFEWLILSAD GGHVKSSSGL GFDADAAIGR APRCDIVILC AGINYADAYD ANVFAWLRRI HSEGCVLGAV STAVFFLAKA RLLEGRRCAV HWESLASFRS EFPNCLATDD IFAIDGRFLT SSGGTVTLDM MLYLISAVEG RELAALISDQ FNHARIRRQD DVQRMSPEDR FGIRNAKLAF VVRRMEASLG DPVEISDLAS SVALSLRQLE RLFHANLGKS PTNFYIELRM TRAKELLVYT ELAIGEIAEI CGYQSASHFG RSYRTRFRES PAATRKAEKR REEPMS
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