Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5684 |
Symbol | |
ID | 8016647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 265873 |
End bp | 266781 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644827837 |
Product | Chitin deacetylase |
Protein accession | YP_002979037 |
Protein GI | 241518409 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.260048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.439054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTG GTGCAAAAGA TCAATTGCGC GATTTTGTCG GCTATGGCCC GAACCCCCCG GTCATCTCCT GGCCAGGCGG GGTCAAGCTG GCGATCAACC TCGTGCTGAA CTACGAGGAG GGCGCGGAGT ATTCCTGGCT CGAGGACGGA CGAAACGATA ATTGGGGCGA GTACAATATT CCCAACAGCC CGCCGCTGCG CGACCTCGGC ACCGAGACCC ATTTCGAATA CGGCAGTCGC GCAGGCGTCT GGCGCCTGGC TCGCATGTTC GACCGTTACG ATATTCCGGT AACGATCTCG GCCTGCGCCG TTGCGCTGGA GAAGAACCCG GCTGTCGTCG ATTGGATGAG TGCCCGCGGC CACGATCTGC TCGGCCACGG GCTGCGCTGG AGCGAATATT CCGGCATGCC GCGCGATGAG GAGGAGCGGC AGCTTCACGA AGCACTGGCC CTTTATGAGA AATTGACCGG CACAAGGCCG ATGGGTTGGA ATTGCCGATC CTTTCCAAGC GTCAACACCC GTGACCTGAT CGTCAGGGAA GGCGGCTTCC TCTATTACTC GGACCCCTGC AACGACGATC TTCCGTATTT CCTCGATCAC GAGGGTACGA AGCTTCTCGT CGTGCCCTAT TCGAAGACGC TGAACGACAG CCGCTATCTG ATCGCGCCCG GCTACAGCAA TCCGCGCGAT TTTGCCGAGG ATTGCCGATC GGCGATCGAC TACATGATCG GCGAAGCCGA CGAGACAGGC GGGCGTATGC TGACGATCGG CGTGCATGCC CGCTGGATGG GCCAGCCTAA TCGCGCCTCG GGTCTGCGTG ACGTGATCGA GCACGTCAAG AAAACGCCAG GTGCGGCCTT CATGCGGCGC CAAGATATTG CCCGTTACTG GATCGATCAT CATGGCTGA
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Protein sequence | MSAGAKDQLR DFVGYGPNPP VISWPGGVKL AINLVLNYEE GAEYSWLEDG RNDNWGEYNI PNSPPLRDLG TETHFEYGSR AGVWRLARMF DRYDIPVTIS ACAVALEKNP AVVDWMSARG HDLLGHGLRW SEYSGMPRDE EERQLHEALA LYEKLTGTRP MGWNCRSFPS VNTRDLIVRE GGFLYYSDPC NDDLPYFLDH EGTKLLVVPY SKTLNDSRYL IAPGYSNPRD FAEDCRSAID YMIGEADETG GRMLTIGVHA RWMGQPNRAS GLRDVIEHVK KTPGAAFMRR QDIARYWIDH HG
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