Gene Rleg_5684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5684 
Symbol 
ID8016647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp265873 
End bp266781 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content60% 
IMG OID644827837 
ProductChitin deacetylase 
Protein accessionYP_002979037 
Protein GI241518409 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.260048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.439054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTG GTGCAAAAGA TCAATTGCGC GATTTTGTCG GCTATGGCCC GAACCCCCCG 
GTCATCTCCT GGCCAGGCGG GGTCAAGCTG GCGATCAACC TCGTGCTGAA CTACGAGGAG
GGCGCGGAGT ATTCCTGGCT CGAGGACGGA CGAAACGATA ATTGGGGCGA GTACAATATT
CCCAACAGCC CGCCGCTGCG CGACCTCGGC ACCGAGACCC ATTTCGAATA CGGCAGTCGC
GCAGGCGTCT GGCGCCTGGC TCGCATGTTC GACCGTTACG ATATTCCGGT AACGATCTCG
GCCTGCGCCG TTGCGCTGGA GAAGAACCCG GCTGTCGTCG ATTGGATGAG TGCCCGCGGC
CACGATCTGC TCGGCCACGG GCTGCGCTGG AGCGAATATT CCGGCATGCC GCGCGATGAG
GAGGAGCGGC AGCTTCACGA AGCACTGGCC CTTTATGAGA AATTGACCGG CACAAGGCCG
ATGGGTTGGA ATTGCCGATC CTTTCCAAGC GTCAACACCC GTGACCTGAT CGTCAGGGAA
GGCGGCTTCC TCTATTACTC GGACCCCTGC AACGACGATC TTCCGTATTT CCTCGATCAC
GAGGGTACGA AGCTTCTCGT CGTGCCCTAT TCGAAGACGC TGAACGACAG CCGCTATCTG
ATCGCGCCCG GCTACAGCAA TCCGCGCGAT TTTGCCGAGG ATTGCCGATC GGCGATCGAC
TACATGATCG GCGAAGCCGA CGAGACAGGC GGGCGTATGC TGACGATCGG CGTGCATGCC
CGCTGGATGG GCCAGCCTAA TCGCGCCTCG GGTCTGCGTG ACGTGATCGA GCACGTCAAG
AAAACGCCAG GTGCGGCCTT CATGCGGCGC CAAGATATTG CCCGTTACTG GATCGATCAT
CATGGCTGA
 
Protein sequence
MSAGAKDQLR DFVGYGPNPP VISWPGGVKL AINLVLNYEE GAEYSWLEDG RNDNWGEYNI 
PNSPPLRDLG TETHFEYGSR AGVWRLARMF DRYDIPVTIS ACAVALEKNP AVVDWMSARG
HDLLGHGLRW SEYSGMPRDE EERQLHEALA LYEKLTGTRP MGWNCRSFPS VNTRDLIVRE
GGFLYYSDPC NDDLPYFLDH EGTKLLVVPY SKTLNDSRYL IAPGYSNPRD FAEDCRSAID
YMIGEADETG GRMLTIGVHA RWMGQPNRAS GLRDVIEHVK KTPGAAFMRR QDIARYWIDH
HG