Gene Rleg_5679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5679 
Symbol 
ID8016642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp258473 
End bp260716 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content62% 
IMG OID644827832 
ProductAlpha-L-fucosidase 
Protein accessionYP_002979032 
Protein GI241518404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.349462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.357027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCTC ATCTTCTCTG GTACGATGCG CCCGCACAGC TATGGACGGA CGCGCTGCCG 
CTCGGCAACG GCCGGCTCGG GGCCATGGTC TTCGGCGATC CCCTGCGCGA ACACCTGCAG
ATCAACGAAT CCACCTTCTG GGCCGGCGGT CCCTATCAGC CCGTTAATCC AGACGCCTTT
GGTCATCTGG GAACCGTGCG GCAGCTGATT TTCGACGGCC ATTATGCGGA CGCCGAGGCG
CTGGCCGAAA AACGTCTGAT GGCACGGCCG ATCAAGCAGA TGTCCTACCA GCCGATCGGC
GATCTCCGCC TCGAATTCAA GTTCGCCGAG AGTGTCTCCG GGTATCGGCG TGCGCTCGAT
CTCGATACCG CCATCGCTAC CTCGTCTTAC ACCGCCAACG GCATCGCCTA CCTGCGCGAA
GCCTTCGTGT CGCCGGTCGA CGGTGTGCTC GTCCTACGCC TCTCGGCTGA CCGGAAACGC
GCGATCAGCT GCCGGATCTC CATCGACAGT CCGCAGCAGG GAGAGATGAG CATAGGCGAG
CGATCGCTGT TGAGCTTTTC GGGGAAGGGC AAAGCGGAAT CCGGCATTGC CGCGGCTCTC
CGGTTCGCCT TTGGCGTCCG GCTTATCAAC AGCGGTGGAA CGGTGAACGC TTCTGGGGGA
GGCTTGTCGG TAGAAGGCGC TGACGAGGTT CTGGTCTTTC TCGACGCGGC AACGAGCTTC
AGGCGCTACG ACGACATTTT GGGACATCCC GAGCGCGATA TCATCGATAG ACTTGAAAGA
GCCGCTTCGC GCGATTTCGT ATCGTTGCGC GACGACCATA TCGAGGAGCA TCGGCGACTG
TTTAGCGCAT TCGCCATTGA TCTCGGATCG ACGCCTGCGG CGTCGCTTCC AACCGACCAA
CGTATCGCTG GATTCGCTGG CGGCGATGAT CCGGCGCTGG CAGCGCTTTA TGTCCAGTTC
GGCCGCTATC TGATGATTGC CTCGTCGCGT CCCGGGACGC AACCGGCCAA TCTGCAGGGC
ATTTGGAATG CGCAAACGGA TCCACCCTGG GGCAGCAAAT ACACAGCCAA CATCAATCTC
CAGATGAACT ATTGGCTGCC GGCGCCGGCC AATCTGCGCG AGTGTCTCGA GCCGCTCGTC
GAAATGGCCG AAGAGCTTGC CGAGACCGGC AAGGTGATGG CACACGTACA CTATCGCGCC
CGCGGCTGGG TCATGCATCA CAATACCGAT CTCTGGCGCG CAACGGGACC GATCGACGGC
GCCAAGTGGG GACTCTGGCC AATGGGCGGT ATCTGGTTGA TGGCGCAGCT GCTGGAAGCA
TGCGACTACC TTGATGACGC CGAAGCGATG CGACGTCGAC TATTTCCGAT CGCCCTGGAG
GCGGCGCACT TCCTCTTCGA CGTGCTTGTT CCGTTCCCCG GCACGGATTA TCTGGTGACG
AACCCATCGC TTTCACCCGA AAACGCCCAC CCGTACGGAG CGTCGATTTG CGCCGGTCCG
GCGATGGACA GCCAACTCAT CCGCGATTTT TTGGGTCTCC TGCGCCCTCT CGCGGTCTCA
ATCGGTGGAG AGCCCGAGCT TGTCGCCGAC ATCGATCGTG TGCTGCCGCG CCTTGCGCCC
GACAGGATCG GCGCGAATGG CCAGTTGCAG GAATGGCTCG AAGACTGGGA CATGCAGGCG
CCGGAGATGC ATCACCGCCA TGTCTCGCAT CTCTACGGCC TTTACCCGAG CTGGCAGATC
GACATGGACA GAACGCCCGA CCTCGCCGCC GCCGCCCGCC GTTCACTGGA GATCCGCGGG
GACGAGGCGA CGGGGTGGGG CATCGGCTGG CGCATCAACC TTTGGGCGCG GCTGCGCGAT
GGCAACCATG CTCATAACGT ACTGAAACTG CTTCTCACAC CGGAACGAAG CTACAAAAAC
CTGTTCGACG CTCATCCGCC CTTTCAGATC GACGGAAATT TCGGCGGTGC GGCAGGCATC
GTGGAAATGC TCGTGCAGTC GCGTCCGGGG GAAATCCATT TACTCCCTGC GTTGCCGACG
GCATGGCCGG GCGGCAGTAT CCGTGGCTTG CGCCTACGCG GCGGCATGCT GCTCGACCTT
GATTGGGAGG ATGGCGAACC GCTGACGATT AGGCTCACGG CCTCGCGCAA TGTCAGCTCG
ATCCTTCGCT TCGGCCAAAC GCGACGCAAA GTCGATCTCG CCGCTGGCGA AAGCTTTTTC
GAGGGCGGAA GCGAGTTCCG CTAA
 
Protein sequence
MTSHLLWYDA PAQLWTDALP LGNGRLGAMV FGDPLREHLQ INESTFWAGG PYQPVNPDAF 
GHLGTVRQLI FDGHYADAEA LAEKRLMARP IKQMSYQPIG DLRLEFKFAE SVSGYRRALD
LDTAIATSSY TANGIAYLRE AFVSPVDGVL VLRLSADRKR AISCRISIDS PQQGEMSIGE
RSLLSFSGKG KAESGIAAAL RFAFGVRLIN SGGTVNASGG GLSVEGADEV LVFLDAATSF
RRYDDILGHP ERDIIDRLER AASRDFVSLR DDHIEEHRRL FSAFAIDLGS TPAASLPTDQ
RIAGFAGGDD PALAALYVQF GRYLMIASSR PGTQPANLQG IWNAQTDPPW GSKYTANINL
QMNYWLPAPA NLRECLEPLV EMAEELAETG KVMAHVHYRA RGWVMHHNTD LWRATGPIDG
AKWGLWPMGG IWLMAQLLEA CDYLDDAEAM RRRLFPIALE AAHFLFDVLV PFPGTDYLVT
NPSLSPENAH PYGASICAGP AMDSQLIRDF LGLLRPLAVS IGGEPELVAD IDRVLPRLAP
DRIGANGQLQ EWLEDWDMQA PEMHHRHVSH LYGLYPSWQI DMDRTPDLAA AARRSLEIRG
DEATGWGIGW RINLWARLRD GNHAHNVLKL LLTPERSYKN LFDAHPPFQI DGNFGGAAGI
VEMLVQSRPG EIHLLPALPT AWPGGSIRGL RLRGGMLLDL DWEDGEPLTI RLTASRNVSS
ILRFGQTRRK VDLAAGESFF EGGSEFR