Gene Rleg_5675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5675 
Symbol 
ID8016901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp253283 
End bp254104 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content58% 
IMG OID644827828 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002979028 
Protein GI241518400 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.102636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0862057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCA AGGCTCCCCG CTGGATTGTC ATCTTCGTCG GCATCATCGC TTGCATCTGG 
GTCATCCCAA TCGTCGGTAT CGTTGTTACC TCCCTGCGTC CTCCCGAGGG CGTCTCGCTT
GGCTGGTGGC ACTTCGAGCG CTTCGATCTG ACCTTCGATG CGTGGCACCG CGTCTGGGAC
AAATATCCGC TGTCCCAATC CATGTGGGTG ACGATGAAAA CAGCGGGGAT CGCGACGGCG
CTGACGATGC TTTTGACGCC GGCGGCGGCC TACGCCTTTC ATTTCCTCAA TTTCCCGTTC
CGCCGCATCT TGCTGATCAT CATCATCAAC GCATTCGTGT TGCCGCAGCA GGTTGTCATC
ATTCCGCTCT TCACGCTGTG GCGCGATCTC GGGCTGATCG ACAACATTCT CTCCGTTCTC
ATTCCCTATG TCGGGATGTC TTTTGCTTGG TCGATCTTCC TCGTCAAAAA TTTCTTCGAG
GATTTCCCGC GCGAACTAGT GGAAGCCGCC AAGATTGACG GCTGCGGACC GATTGCGACT
TTCCGTCACG TGGTACTGCC GAACAGCCTG TCGCCGATCT TCGCCGTCGG AATCCTGCAG
TTCCTCTGGA CCTGGAACGC CCTGCTGCTG CCGATGCTTT TCCTGCGCAA CGACATACCC
CTGCCCGTGC TGCTTGCCCG CATCTCCGGC AGCTACGAGA TCAATTGGGA CTTGCGCTCG
GTGGCGGCGA TCATCACGAC AATCGTTCCC CTCCTCGTCT TTCTTGTCTT CCAACGTCAG
TTCGCCGCCG GCTCTCAAAC CCGCACCGGC GCAAAGGAAT AG
 
Protein sequence
MIGKAPRWIV IFVGIIACIW VIPIVGIVVT SLRPPEGVSL GWWHFERFDL TFDAWHRVWD 
KYPLSQSMWV TMKTAGIATA LTMLLTPAAA YAFHFLNFPF RRILLIIIIN AFVLPQQVVI
IPLFTLWRDL GLIDNILSVL IPYVGMSFAW SIFLVKNFFE DFPRELVEAA KIDGCGPIAT
FRHVVLPNSL SPIFAVGILQ FLWTWNALLL PMLFLRNDIP LPVLLARISG SYEINWDLRS
VAAIITTIVP LLVFLVFQRQ FAAGSQTRTG AKE