Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5591 |
Symbol | |
ID | 8016817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 173711 |
End bp | 174232 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644827757 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002978957 |
Protein GI | 241518329 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0697361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00510945 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGCTC TATCTTCACA ACGTCCCGCG TCGCAAGAAA CATCCTCGGT CGAGCTGGAG ATTGTCGAAC TGACACCGGC GTTGCACGCA TTTGCCCGAA GATTCCTGCG TAGTGAGGAC GACATCGATG ATCTCGTGCA AGAAACGCTG CTGAAGGCGT TGAATTCGAT CCAGCTGTAC CATCCAGGCA CTTCTCTCAA GTCCTGGCTC TTCACCATCC TTCGAAATAC GTTCTGCAGT AATTATCGTC GGCGGAAGCG CGAGCCGGTC GGAATGGATG TGACCATGGA ACAGGTCTCT GTCGCCCCGA GCCAGGAGTG GGCGCTTCGC GAGCGTGAGC TGCGACAAGC AATGACGCGC CTCTCCGACG ACCGACGCCG CGCGTTGACG CTGGTGGCCG CCGGAACGAG CTATGAAGAT GCCGCCAGGA TCTGCGGCTG CCGCATCGGC ACCTTGAAAA GCCGCGTCAG CCGGGCCCGC GAAACCTTGC ATTCGCTGCT TGGGAACCAG CTGATCGACT GA
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Protein sequence | MTALSSQRPA SQETSSVELE IVELTPALHA FARRFLRSED DIDDLVQETL LKALNSIQLY HPGTSLKSWL FTILRNTFCS NYRRRKREPV GMDVTMEQVS VAPSQEWALR ERELRQAMTR LSDDRRRALT LVAAGTSYED AARICGCRIG TLKSRVSRAR ETLHSLLGNQ LID
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