Gene Rleg_5591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5591 
Symbol 
ID8016817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp173711 
End bp174232 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content59% 
IMG OID644827757 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002978957 
Protein GI241518329 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0697361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00510945 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGCTC TATCTTCACA ACGTCCCGCG TCGCAAGAAA CATCCTCGGT CGAGCTGGAG 
ATTGTCGAAC TGACACCGGC GTTGCACGCA TTTGCCCGAA GATTCCTGCG TAGTGAGGAC
GACATCGATG ATCTCGTGCA AGAAACGCTG CTGAAGGCGT TGAATTCGAT CCAGCTGTAC
CATCCAGGCA CTTCTCTCAA GTCCTGGCTC TTCACCATCC TTCGAAATAC GTTCTGCAGT
AATTATCGTC GGCGGAAGCG CGAGCCGGTC GGAATGGATG TGACCATGGA ACAGGTCTCT
GTCGCCCCGA GCCAGGAGTG GGCGCTTCGC GAGCGTGAGC TGCGACAAGC AATGACGCGC
CTCTCCGACG ACCGACGCCG CGCGTTGACG CTGGTGGCCG CCGGAACGAG CTATGAAGAT
GCCGCCAGGA TCTGCGGCTG CCGCATCGGC ACCTTGAAAA GCCGCGTCAG CCGGGCCCGC
GAAACCTTGC ATTCGCTGCT TGGGAACCAG CTGATCGACT GA
 
Protein sequence
MTALSSQRPA SQETSSVELE IVELTPALHA FARRFLRSED DIDDLVQETL LKALNSIQLY 
HPGTSLKSWL FTILRNTFCS NYRRRKREPV GMDVTMEQVS VAPSQEWALR ERELRQAMTR
LSDDRRRALT LVAAGTSYED AARICGCRIG TLKSRVSRAR ETLHSLLGNQ LID