Gene Rleg_5585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5585 
Symbol 
ID8016476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp167863 
End bp168918 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content62% 
IMG OID644827751 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002978951 
Protein GI241518323 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.151939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0166428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAA GGACGCGAAA CGGAAGAGTA AAGACCGTGC TTGTCGCCGG TGGAGCCGGT 
TTTGTCGGTT CTCATTTATG CGATGCGCTG CTGGCCCGCG GCGACCGGGT GATCTGTGTC
GACAGCTATA TCACCGGATC GGAGGACAAT GTCCGGCCGT TGATCAACCA TCCGAAGTTC
CATCTGATCG AAAAGGACAT CTGCCATCTC CATGGTGTCG ACGAGCATTT GGACCAGATC
TACAACCTCG CGTGCGCGGC ATCGCCCCCA CAATATCAGG CGGACCCGGT GCATACGATG
ATGACCTGCG TTGCCGGCAC CGGCAATTTG CTTTCGCTGG CCGAACAGCA TCATGCCTCG
CTCCTGCAGG CGTCGACGAG CGAGGTCTAC GGCGACCCCG TCGAGCATCC GCAGACAGAG
GATTACCGCG GCAATGTCAG CTGCACAGGC CCGCGCGCCT GCTACGACGA AGGCAAGCGG
GCGGCGGAAG CGCTTTGCTT CGATATGCTG CGGGCCGGCA AGGTGGACGC ACGTGTTGCC
CGCATCTTCA ACACCTATGG GCCTCGCATG CAGCCGAGTG ACGGGCGGAT CATCTCCAAT
CTGCTGGTGC AAGCCATATC AGGCGCGCCG CTGACGATTT ATGGAAGCGG CGACCAGACG
CGTTCCTTCT GCTTCGTCAG CGACCTCGTT GCGGGCCTGA TGGCGCTGAT GGATGTCGAT
CCAAATCCGG GCGTCCCGGT TAATCTCGGC AATCCCGGCG AGTTCACGAT CAACCGGCTG
GTGGACATGG TGCTGGCCAT GGTGCCGTCG ACATCCGTCG TCGTCCACAA GCCGCTGCCG
CAAGACGACC CACAGCGCAG ACGGCCCGAT ATCTCACGCG CAAAAGACCT TCTCGGCTGG
CAGCCGACGA TTCCGCTTGC CGAAGGTCTA CGCCTGACGG CCGATTGGTT CATCGCCGCG
GCCCGTCCAG ACGGCGACTT CGATGACGCG CAAGTCACGC GGCGCTCGAC TTGGCGACGG
CGCGCAAAAG CTGGACGCGC CGCGATTGGC ATCTGA
 
Protein sequence
MLQRTRNGRV KTVLVAGGAG FVGSHLCDAL LARGDRVICV DSYITGSEDN VRPLINHPKF 
HLIEKDICHL HGVDEHLDQI YNLACAASPP QYQADPVHTM MTCVAGTGNL LSLAEQHHAS
LLQASTSEVY GDPVEHPQTE DYRGNVSCTG PRACYDEGKR AAEALCFDML RAGKVDARVA
RIFNTYGPRM QPSDGRIISN LLVQAISGAP LTIYGSGDQT RSFCFVSDLV AGLMALMDVD
PNPGVPVNLG NPGEFTINRL VDMVLAMVPS TSVVVHKPLP QDDPQRRRPD ISRAKDLLGW
QPTIPLAEGL RLTADWFIAA ARPDGDFDDA QVTRRSTWRR RAKAGRAAIG I