Gene Rleg_5579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5579 
Symbol 
ID8016470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp160276 
End bp161382 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content63% 
IMG OID644827745 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002978945 
Protein GI241518317 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.850115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.207226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGA TCCTTGTAAC CGGCGGCTGC GGCTTTATCG GAAGACATGT TGTCGAGGAA 
CTTCTCGACA ACGGCTATGA GGTGCGGGTC CTCGATGCGT TGATCGATCA GGTTCACGGC
GATGCCGAAA CGGCGCCGCC CGAGGCCGCC GAAATCGTGC GCGGCGACGT TAGGGACAAA
ACAGCGGTCG AACGGGCTTT GTTGGGTGCC GATGGCGTCA TCCATCTCGC CGCTGAGGTC
GGCGTCGGAC AGTCGATGTA CGAGATCGCC CGATATGTCG GCGGCAATGA TCTTGGCACG
GCGGTCCTTC TGGAGGCGAT GATCGGTCGC CGGCCCAGAC GCGTTGTCGT CGCCTCGTCC
ATGAGCGTCT ATGGCGAGGG CCGATATGAG ACCGCCGAAG GCGCGCAACT CGATCTGGTC
AGGCGACGCA GCGACCAGAT CAGGGCCGCC CAATGGGATC CGCGTGGCGC TGACGGCAAA
GACCTGAGGC CGGTCGCGAC GGATGAGGAA AAGCCCGTCG ATCTCGCCTC GATCTACGCG
CTGACGAAAT ACGCGCAGGA AAAACAGGTC CTGATCTTTG GCGAAGCCTA TGGCGTGGAG
GCAGTGGCGC TCCGTCTCTT CAACGTATTC GGCGCCGGCC AGGCCCTGTC CAATCCCTAT
ACCGGCGTGT TGGCGAACTT CGCCTCGAGG CTCGCCAATG GCCAGCCGCC TATGATCTTC
GAGGACGGCG AGCAGCGACG GGATTTCGTG CATGTGCGCG ACGTGGCGCG CGCCTTCCGC
CTGGCGCTCG AAAAACCCGA CGCGCCGGGA CATGTGATCA ATATCGGCAG CGGCCAGGCC
TATACGATCA CCGAAGTCGC GACGCTTCTC GCCGACGCGA TGGGCGTGCC GGAGATACGG
CCCGAGATCA TGAACAAGGC GCGCTCCGGC GATATCCGCA ACTGCTTTGC CGACATCGCG
AAGGCGCGCG AACTGCTCGG CTTCGAGCCG CGCTTCAAGC TGGAAAACAC GCTCGGACCT
TTCGCCGATT GGGTGAGAAA TGCCGGAGCG ATCGATCGCG GCGCGGAGAT GAAACGACAG
TTGGAGGAAA GAGGGCTGGT ATCATGA
 
Protein sequence
MAMILVTGGC GFIGRHVVEE LLDNGYEVRV LDALIDQVHG DAETAPPEAA EIVRGDVRDK 
TAVERALLGA DGVIHLAAEV GVGQSMYEIA RYVGGNDLGT AVLLEAMIGR RPRRVVVASS
MSVYGEGRYE TAEGAQLDLV RRRSDQIRAA QWDPRGADGK DLRPVATDEE KPVDLASIYA
LTKYAQEKQV LIFGEAYGVE AVALRLFNVF GAGQALSNPY TGVLANFASR LANGQPPMIF
EDGEQRRDFV HVRDVARAFR LALEKPDAPG HVINIGSGQA YTITEVATLL ADAMGVPEIR
PEIMNKARSG DIRNCFADIA KARELLGFEP RFKLENTLGP FADWVRNAGA IDRGAEMKRQ
LEERGLVS