Gene Rleg_5547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5547 
Symbol 
ID8016438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp134543 
End bp135052 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content58% 
IMG OID644827714 
ProductInvasion associated locus B family protein 
Protein accessionYP_002978914 
Protein GI241518286 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.572174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000199147 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAGTG GATTCAACCG CGCCGGATCG TTGGCCCTGG GCGCCGCTGC GCCGAGCGAA 
CAACTCCTCG TCGCCGCCGA CGGCATAAAG GAGAAATACG ATGACTGGGG CGTTGAATGC
GCGGTCGTCG ACGTCGGAAA GCAATGTGCC GCGGGTCAGT TTCATGAAGA TCCAAAGAGC
GGTTTGGTTG CGTTCGCAAT TCAGGTCTAC CCTTCTGAAG AGCTGGGCAC GAGGGTCCTG
ATCAGGATGC CGCTCGGCTT GAAGTTGTCG GACGGCGTGC GCCTCGAGCT TGATACGCAA
CCCTCAAAAC AACATGCGGA TGTTGCGACG TGCCTGCCCG ATGGTTGCGT CGTTCTTCTC
ATCATGTCCG ACGCCACCAT AGACATTTTG AAAGCCGCGC AGGTGCTCAC GGTGAGCGCC
ACTTCGTTTG CTTCAGGTGG TAAGTTGACC TTTCGCGTCT CTCTGAAGGG GTTTCCTCGT
TCGCTCGAAC GGCTGGATGA ACTGCGATGA
 
Protein sequence
MESGFNRAGS LALGAAAPSE QLLVAADGIK EKYDDWGVEC AVVDVGKQCA AGQFHEDPKS 
GLVAFAIQVY PSEELGTRVL IRMPLGLKLS DGVRLELDTQ PSKQHADVAT CLPDGCVVLL
IMSDATIDIL KAAQVLTVSA TSFASGGKLT FRVSLKGFPR SLERLDELR