Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5547 |
Symbol | |
ID | 8016438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 134543 |
End bp | 135052 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644827714 |
Product | Invasion associated locus B family protein |
Protein accession | YP_002978914 |
Protein GI | 241518286 |
COG category | [R] General function prediction only |
COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.572174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000199147 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAAAGTG GATTCAACCG CGCCGGATCG TTGGCCCTGG GCGCCGCTGC GCCGAGCGAA CAACTCCTCG TCGCCGCCGA CGGCATAAAG GAGAAATACG ATGACTGGGG CGTTGAATGC GCGGTCGTCG ACGTCGGAAA GCAATGTGCC GCGGGTCAGT TTCATGAAGA TCCAAAGAGC GGTTTGGTTG CGTTCGCAAT TCAGGTCTAC CCTTCTGAAG AGCTGGGCAC GAGGGTCCTG ATCAGGATGC CGCTCGGCTT GAAGTTGTCG GACGGCGTGC GCCTCGAGCT TGATACGCAA CCCTCAAAAC AACATGCGGA TGTTGCGACG TGCCTGCCCG ATGGTTGCGT CGTTCTTCTC ATCATGTCCG ACGCCACCAT AGACATTTTG AAAGCCGCGC AGGTGCTCAC GGTGAGCGCC ACTTCGTTTG CTTCAGGTGG TAAGTTGACC TTTCGCGTCT CTCTGAAGGG GTTTCCTCGT TCGCTCGAAC GGCTGGATGA ACTGCGATGA
|
Protein sequence | MESGFNRAGS LALGAAAPSE QLLVAADGIK EKYDDWGVEC AVVDVGKQCA AGQFHEDPKS GLVAFAIQVY PSEELGTRVL IRMPLGLKLS DGVRLELDTQ PSKQHADVAT CLPDGCVVLL IMSDATIDIL KAAQVLTVSA TSFASGGKLT FRVSLKGFPR SLERLDELR
|
| |