Gene Rleg_5538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5538 
Symbol 
ID8016429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp124975 
End bp125694 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content64% 
IMG OID644827705 
ProductABC transporter related 
Protein accessionYP_002978905 
Protein GI241518277 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0994391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000070517 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCAATTC TCGAACTCGA TGGGGTCTCG AAGAAATTCG GCGCATTGAC GGTCGCCGAG 
CAGATTTCCT TTGCCGTCGG CGAAGGCGAG GCGCTTGGCA TTATCGGGCC GAACGGCGCC
GGCAAGTCGA CGCTGTTCAA TTTGATAACC GGCAATATCC CCGCCGACAG CGGAAGCATC
CGCTTTCTCG GCGGCGACGT GACGCGCACG CCGCCGATGG CGCGCTGCCT GGCGGGCATC
GGCCGCACCT TCCAGATCCC GCAGCCGTTC GAGAAGCTGA CGGTCTTTGA AAACCTCCTG
GTCGCAGGCG CTTTCGGCTC GCGGCGGCGC GAGGTCGAGG TGTCGGACCG CTGCGCCGAA
ATCCTGGTGG ACACCGGGCT GATCGACAAG GCGAATGTTT TGGCCGGAAG CCTGTCGTTG
CTGCTGCGCA AACGGCTGGA GCTCGCCCGA GCGCTGGCGA CGGAACCGAA GCTGCTCCTG
CTCGATGAAA TCGCCGGCGG GCTGACGGAG GGCGAATGCC GGTCGCTGGT GGCCACCATC
CGCGCCATTC ATGCGCGCGG CGTTGCCGTC ATCTGGATCG AGCACGTGCT GCATGCGCTG
AATTCCGTCG TCGAGCGGCT GCTGGTGCTG CATTTCGGCA AGGTCATCGG CATCGGCAAG
CCCGACGACA TCATGGCATC GCGCGACGTG CGTGAAATCT ATCTGGGGAT CGAGATCTGA
 
Protein sequence
MAILELDGVS KKFGALTVAE QISFAVGEGE ALGIIGPNGA GKSTLFNLIT GNIPADSGSI 
RFLGGDVTRT PPMARCLAGI GRTFQIPQPF EKLTVFENLL VAGAFGSRRR EVEVSDRCAE
ILVDTGLIDK ANVLAGSLSL LLRKRLELAR ALATEPKLLL LDEIAGGLTE GECRSLVATI
RAIHARGVAV IWIEHVLHAL NSVVERLLVL HFGKVIGIGK PDDIMASRDV REIYLGIEI