| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5536 |
|---|
| Symbol | |
|---|
| ID | 8016427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012853 |
|---|
| Strand | - |
|---|
| Start bp | 123406 |
|---|
| End bp | 124269 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644827703 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002978903 |
|---|
| Protein GI | 241518275 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0898761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00000762258 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGC TTGATACCAT TCTCCAGGGC GTGCTGCTCG GCGGGCTCTA CGCGCTGTTT
GCGGCGGGGC TCAGTCTCAT CTTCGGCATC ATGCGGCTGG TCAACCTCGC CCATGGCGAT
CTGATCGTGC TTGCCGCCTT CCTGATCCTG GTCCTGGTGA CGACGCTCGG GCTCAATCCG
TTCGTTGCCG CCGCGATCGC GATGCCGTTG ATGTTCGCGA TCGGCTGGGG ACTGCAATAT
TTCCTGCTCA ACCGCACGCT CGGCAAGGAT ATCCTGCCGC CGCTGCTTGT CACTTTCGGC
CTGTCGATCG TCATCCAGAA CGGCCTGCTC GAAGGATTTT CGGCCGATAG CCGCCGTGTC
TTTGCCGGGA GCCTAGAAAG CGCCTCCGTC AATCTCGGCC CGGTCACCGC CGGCATCATG
CCGCTGATGA CCTTCTTTTC CGCCGTCGCC GTCATCGTCT GTCTCAACCA GCTCATCTAC
CGCACCTCCG TCGGCCGCGC CTTCCGGGCG ACCTCGGACG ATCCGGTGAC GGCCGGGCTG
ATGGGCATCC GGCCGCAACG TATCTTCGCC ATGGCGACAG GGCTTGCCAT GGTCGTGGTG
ACGATCGCTG CCCTTTATCT CGGGACCCGC GCCAATTTCG ATCCGACGTC GGGACCGGCG
CGGCTGATCT ATGCCTTCGA AGCGGTGATC ATCGGCGGGC TCGGCTCGCT CTGGGGCACG
CTCGCCGGCG GCATCATCCT TGGCGTTGCC CAGACGGTGG GTGCCGCGAT CAATCCGGAG
TGGCAGATCC TTGCCGGCCA CCTGGCATTC CTCGCCGTTC TCCTGTTCAA GCCGCGCGGC
CTTTTCCCGC GCGCGGTGGA TTGA
|
|---|
| Protein sequence | MNWLDTILQG VLLGGLYALF AAGLSLIFGI MRLVNLAHGD LIVLAAFLIL VLVTTLGLNP
FVAAAIAMPL MFAIGWGLQY FLLNRTLGKD ILPPLLVTFG LSIVIQNGLL EGFSADSRRV
FAGSLESASV NLGPVTAGIM PLMTFFSAVA VIVCLNQLIY RTSVGRAFRA TSDDPVTAGL
MGIRPQRIFA MATGLAMVVV TIAALYLGTR ANFDPTSGPA RLIYAFEAVI IGGLGSLWGT
LAGGIILGVA QTVGAAINPE WQILAGHLAF LAVLLFKPRG LFPRAVD
|
|---|
| |