Gene Rleg_5535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5535 
Symbol 
ID8016426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp122311 
End bp123396 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content64% 
IMG OID644827702 
Productinner-membrane translocator 
Protein accessionYP_002978902 
Protein GI241518274 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.875545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00000782274 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCATGG CCATTCCCTC CTTCACCGTC GAGACGCGTA CCAGGGCATC GACATTGTCG 
GCTGTCGCGG TCGTTGCCCT TCTGCTGCTT GCCTTCGCCG CACCCTTCAT CGTCTCGCGC
GGCGTCATCC AGGACCTTTT CTTCATCCTG ACCATGCTGG TGCTGGCGCA GAACTGGAAC
CTGCTTGCCG GTTATGCCGG GCTGATCTCG GTCGGCCAGC AGGTCTTCGT CGGCTTTGGC
GCCTATACGA TGTTCGGCTG CGTCATCCTG TTCGGCGTCG ACCCGGTCGT GGCCATACTG
ATTGCCGGCG TATTATCCGC CGCCCTCGCC ATTCCCACGG CCTTCTTCAC CTTCCGCCTC
TACGGTCCTT ATTTCGCCAT CGGCACCTGG GTGGTGGCCG AGGTCGTGCG GTTGCTGCTG
GCCCAGTGGA AGGCGCTCGG CGGCGGCACC GGCACCTCGT TGCCGCGGGA GGCGACCCGC
GACATGATGG GCGTCGGCGC GATGCGCGAC CTCTTCGGCA TGAAGGCTTC CGAGGCGGGC
GACACGCTGA CTTACTGGCT GGCGCTGATC CTCGCCGTCG CCACAATTGG CTTCATCTAT
GGTCTTCTGC GCAGCAAGCA GGGTCTCGGC CTAGCCGCCG TCCGCGACAA CGAGCAGGCC
GCCCGCGCCG TCGGCGTCGA TGCGCGGCGG ATGAAGACGC TGGTCTATCT GGCGACCGCC
TTCATGACAG GCATCGCCGG GGCGCTGATC TACGTGCAGA AGGCGCGCAT CTCGCCGGAC
GCCGCCTTCT CGGTCACCGA CTGGACGGCC TATGTCATCT TTATCGTCGT GACCGGCGGC
ATCGGCACGA TCGAGGGACC GATCCTCGGC GTCATCATCT TCTTTCTCTT ACAGAACCTC
TTGGCCGACT ACGGCTCCTG GTACCTGCTG ATGCTCGGTC TTCTCGGCAT CGCCATCATG
CTTCTTGCGC CGCGCGGCCT CTGGGGATTG TTCTCCGAGC GCACCGGCAT CCAGCTTTTC
CCGGTTCGCC GCGTCCTGAA GGGCGGGCCG CTCAATCTCA CGCATAGGGG AGGGCCTCAT
GGCTGA
 
Protein sequence
MTMAIPSFTV ETRTRASTLS AVAVVALLLL AFAAPFIVSR GVIQDLFFIL TMLVLAQNWN 
LLAGYAGLIS VGQQVFVGFG AYTMFGCVIL FGVDPVVAIL IAGVLSAALA IPTAFFTFRL
YGPYFAIGTW VVAEVVRLLL AQWKALGGGT GTSLPREATR DMMGVGAMRD LFGMKASEAG
DTLTYWLALI LAVATIGFIY GLLRSKQGLG LAAVRDNEQA ARAVGVDARR MKTLVYLATA
FMTGIAGALI YVQKARISPD AAFSVTDWTA YVIFIVVTGG IGTIEGPILG VIIFFLLQNL
LADYGSWYLL MLGLLGIAIM LLAPRGLWGL FSERTGIQLF PVRRVLKGGP LNLTHRGGPH
G