| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5533 |
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| Symbol | |
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| ID | 8016424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012853 |
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| Strand | - |
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| Start bp | 119672 |
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| End bp | 120559 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644827700 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_002978900 |
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| Protein GI | 241518272 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.247277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00000648247 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGATG CACATGAAAA GGGTTTCTTC ACGGAAGAGA ACTCCGTTGA GGTGGTCACG
AGCCGCAACG CCACCACCAA GGACCAGCGC CTGAAGCGCG TGATGGAGGT CGTGACACGC
AAGCTGCATG AGGCGGTGAA GGAGCTTGAG CCGACGCAGG ACGAATGGAT GGAGGCAATT
CTCTTTCTGA CCCGCACAGG ACATACATGC AACGAATGGC GACAGGAATT TATCCTGCTG
TCGGACGTGC TCGGCGTGTC GATGCTGGTC GACGCCATTA ATAACCGCAA GCCCTCAGGC
GCCTCCGAAA GCACTGTTCT TGGCCCGTTT CACGTTGCCG ACGCGCCGGA ACTGCCGATG
GGCACCAATA TCTGCCTCGA TCACAAGGGC GAGGACATGG TGATCGGCGG CAGCATCCGT
AGCACGGATG GCAGACCGAT TGCCGGCGCT GTCATCGACG TCTGGCAGGC CAACGACGAA
GGCTTCTACG ACGTGCAGCA GAAGGGGATC CAACCAGACT TCAACCTTCG CGGCATCTTT
CGCAGCGGCG CGGATGGCCG CTATTGGTTT CGCGCAGTCA AGCCCAAGTA TTACCCGATC
CCGGACGATG GACCGGTCGG CAAGCTGCTC GGCGCGCTCG GTCGTCACCC CTACAGGCCC
GCTCACCTGC ACTACATCAT CAAGGCCGAC GGCTTCGAGA CGCTCACGAC GCACATCTTT
GATCCGGACG ATCCGTACAT CCACTCCGAC GCAGTCTTTG GCGTGAAGGA GAGCTTGCTT
GCCAAGTTCC AGCAAGTCGA GGATTCGGTA CGCGCTGACG AGCTTGGTTT CTCTGGCAAG
TTTTGGCAGA TAGAGCACGA TTTCGTGCTG GCTCGGCCCG AGGAGTAG
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| Protein sequence | MIDAHEKGFF TEENSVEVVT SRNATTKDQR LKRVMEVVTR KLHEAVKELE PTQDEWMEAI
LFLTRTGHTC NEWRQEFILL SDVLGVSMLV DAINNRKPSG ASESTVLGPF HVADAPELPM
GTNICLDHKG EDMVIGGSIR STDGRPIAGA VIDVWQANDE GFYDVQQKGI QPDFNLRGIF
RSGADGRYWF RAVKPKYYPI PDDGPVGKLL GALGRHPYRP AHLHYIIKAD GFETLTTHIF
DPDDPYIHSD AVFGVKESLL AKFQQVEDSV RADELGFSGK FWQIEHDFVL ARPEE
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