| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5528 |
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| Symbol | |
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| ID | 8016419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012853 |
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| Strand | - |
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| Start bp | 113939 |
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| End bp | 115318 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644827695 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_002978895 |
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| Protein GI | 241518267 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0703948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000405618 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCGTTC GACTGAGCCA TCTGACAATC ATTGCACTTG TGACTGCGTC GTCGGCTTCC
GCGGAGGATG CGGGACTGGC GATCACCGTC CCGCCCATCA ATCCAATAGG CGGCGTTCAG
GAACCTGTAT TCATCGGGCC ACTGTCGTCG ACCGGTAAAT GGCTTCACGA CAACGGCATC
GATATCAACC TTGATTATAT CAACATCTAT CAAAACGCTC CCTCTTTTGG GTTCGAAAGA
GGGTCCTCTG CGAACTATGG CATGTTTGTC TTCGGTGCCA CCGGTAACCT GACGCCCGAT
CTAAGAGTGA AGTGGGTGGA GACGATAAAT TATCCGTCGT TCAACACCGA TAACTATCTG
TTCGATCTAT CAAACTCGTT TTTCCCAGTC CCGGTTGTCG ACAGTCGAAC CGACCTGACG
CGCCTGACTG TGGAAGCTGA TTTTCTCGAG GACCGGCTTG AAATAGAGGC GGGTCGAATG
GGGCTCGGTC AAGACTTCAT GACGCGGGGC TACTGCGGAG GGCTTGGATG TGTGAATTCG
ACGCTGGCGA TAACCCTTAA CATGCCGGGA GAGGGCCTTT CCGTTTGGGG CGCGCGCGGC
GAATACCATC TCACCCCGAA TACCGCAGTC GGCTTGGGTA TAATTGAGGA CAACGCAGAC
AACTGGCAAG AGGGAAGCGG CTGGGATTGG GGCAGAGGCG ATGCTGATGG TATGATCGCG
ATTGCAAACC TTACGCACCA GGAGTCGTTC TTCGACGATC CCAATCCGTT GAGATTCGAG
ATAGGTGCCT ACCACCGTTC ATCGCGATAC GAGGACGCGC TCTATAATTC CGGATGGGGA
AATCCCACCT TCGGTCCCAG CCCGACGATC ATCGAGCACC AAGGAACGAC CGGAGTTTAC
GGGCAGGTTC GAAAGGTCGT CTGGAGCGCT CCCGACAGCG GTCCCATACC AGAGAATATC
GCACTTTACG GTGGCTTGTT TCATACCTTC GGTGACGGTC AGTCCTATCC GTGGGAGGCC
TATGCCGGGA TCGAATATTC CGGTTTCTGG GCGGAGAACC CGCTCGCCAC GATCGGCGCG
TCCGTCCATT ACCTCGGACT GAGCGAGAAG CGAGCTGAAT ATGAGCGAAA CGCCCGGCTG
TTCTTTTCCG GCATCGATGA AAAGCAGCCC CGGGATACGT TCATGTTCGA CGTTCACGGA
AGCGTGGGCG TCTTCGAGCG CGGTGTGCTC GATCTTGGCG CCGCCTACAT CGTCAATCCC
AACACGTCGG TCCTGAGTGA CTATTCGACC GCCAGGCAGC AGGACGGATT TGTCTTATAC
GCGACGCTTG CGTTCGACCT CGGCGGAGGC CTTGGCCTCT CACCACTACG CCGGCCGTAG
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| Protein sequence | MRVRLSHLTI IALVTASSAS AEDAGLAITV PPINPIGGVQ EPVFIGPLSS TGKWLHDNGI
DINLDYINIY QNAPSFGFER GSSANYGMFV FGATGNLTPD LRVKWVETIN YPSFNTDNYL
FDLSNSFFPV PVVDSRTDLT RLTVEADFLE DRLEIEAGRM GLGQDFMTRG YCGGLGCVNS
TLAITLNMPG EGLSVWGARG EYHLTPNTAV GLGIIEDNAD NWQEGSGWDW GRGDADGMIA
IANLTHQESF FDDPNPLRFE IGAYHRSSRY EDALYNSGWG NPTFGPSPTI IEHQGTTGVY
GQVRKVVWSA PDSGPIPENI ALYGGLFHTF GDGQSYPWEA YAGIEYSGFW AENPLATIGA
SVHYLGLSEK RAEYERNARL FFSGIDEKQP RDTFMFDVHG SVGVFERGVL DLGAAYIVNP
NTSVLSDYST ARQQDGFVLY ATLAFDLGGG LGLSPLRRP
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