| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5514 |
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| Symbol | |
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| ID | 8016405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012853 |
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| Strand | - |
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| Start bp | 99245 |
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| End bp | 102568 |
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| Gene Length | 3324 bp |
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| Protein Length | 1107 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644827681 |
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| Product | Dtr system oriT relaxase |
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| Protein accession | YP_002978881 |
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| Protein GI | 241518253 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02768] Ti-type conjugative transfer relaxase TraA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0765264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGTCC CTCATTTCTC CGTCAGCATC GTCGCCCGTG GCTCCGGCCG CAGCGCCGTG
CTGTCGGCGG CCTACCGGCA CTGCGCGAAG ATGGACTATG AGCGGGAAGC CCGGACGATC
GACTACACCC GCAAGCGTGG TCTCCTGTAT GAGGAGTTCG TCATTCCGGC AGGGGCTCCC
ACATGGCTGC GTGCCATGAT CGCGGACAGG TCGGTGTCCG GAGCGTCCGA AGCCTTCTGG
AACAAGGTCG AGGCGTTCGA AAAGCGATCG GACGCGCAGC TCGCCAAGGA CGTCACCATT
GCCCTTCCGA TCGAGCTCTC TGCCGAGCAG AGCATTGCTC TCGTCCGGGA TTTCGTGGAG
CGGCACATCA CGTCGAAGGG CATGGTCGCC GACTGGGTCT ATCACGACGC ACCGGGCAAT
CCGCATGTCC ATCTGATGAC GACGCTCAGG CCGCTGACAG AGCGCGGGTT CGGCGCAAAG
AAGATTGCGG TGACCAGTCC GGACGGTAAC CCGATGCGCA ACGATGCCGG CAAGATCGTC
TATGAACTCT GGGCGGGAAG CGCAGACGAT TTTAATACGA TTCGCGATGG TTGGTTCGCC
TGTCAGAATA GGCATCTTGC CCTTGCCGGT CTCGACATCC GCGTCGACGG GCGGTCCTTT
GAAAAGCAGG GCATCGAACT GACCCCGACC ATCCATCTCG GTGTCGGCAC CAAAGCGATC
GACCGCAAGG CGGAACAAGC CAACGCAAGG TCGTCGGCAT GGTCGCCAAA GCTCGAACGC
ATTGAACTGC AGGAAGACCG CCGCACGGAA AATGCCCGAC GCATACAGCG CCGTCCGGAA
ATCGTTCTCG ACCTCATCAC GCGGGAGAAG AGCGTCTTCG ATGAACGCGA CGTGGCGAAG
ATCCTGCACC GCTATATCGA CGATGCCGCT CTGTTCCAGA ACCTGATGGT GAGGATCCTG
CAGAGCCCGG AGGCGCTGCG GCTCGAACGT GACCGGATCG ACTTTGCGAC TGGTATCCGG
ACGCCTGCCA AGTACACGAC GCGGGAGATG ATCCGGCTTG AAGCCGAGAT GGTCAGCCGG
GCTATCTGGC TGTCCGGGCG CGCCTCTCAT GGCGTACGCG AGGCGGTGCT GGAGGCGACG
TTTGCGCGCC ATGCCCGTCT GTCGGATGAA CAGCGGACTG CGATCGAACG TGTGGCTGGC
GGCGAACGGA TCGCCGCCGT CATCGGCCGC GCCGGCGCCG GTAAGACGAC GATGATGAAG
GCGGCGCGCG AAGCCTGGGA AGCGTCCGGC TATCGTGTCG TCGGTGGTGC GCTTGCCGGC
AAAGCAGCCG AGGGCCTGGA GAAGGAAGCC GGTATTCAGT CCCGCACGCT GTCGTCGTGG
GAGCTGCGCT GGAACCAGAG CCGCGACCAG ATCGACACGA GAACCGTTTT CGTGCTGGAT
GAGGCCGGCA TGGTGTCGTC GCGGCAGATG GCGCTGTTCG TCGAGGCCGT GAGCAAGGCC
GGCGCAAAGC TTGTGCTCGT CGGTGACCCC GAACAGTTGC AGCCGATCGA GGCGGGAGCT
GCCTTCCGGG CGATCGCCGA CCGGATCGGC TATGCCGAGC TCAAAACGAT CTATCGTCAG
CGCCAGCAAT GGATGCGCGA CGCCTCGCTC GATCTGGGGC GCGGCAATGT CGGCCAAGCG
GTTGATGCCT ATCGTGCCCA TGGGCATGTC AGGGGGTTGG ACCTCAAGGC GCAGGCCGTC
GAAAGCCTGA TCGCCGATTG GGATCGCGAC TACGATCCTT CGAAGAGCAG CCTGATCCTC
GCACACCTTC GGCGCGACGT TCGGATGTTG AACGATATGG CTCGAGCCAA GCTGGTCGAG
CGCGGCATCC TCGCGGACGG CTTTGCCTTC AAGACCGAGG ACGGAACCCG CATGTTCGCG
GCCGGCGACC AGATCGTGTT CCTGAAGAAC GAGGGTAGCC TTGGCGTCAA GAACGGTATG
TTGGCCAAGG TGATCGACGC TGCAGCTGGG CGGCTCGTGG TGGCACTTGG CGAAGGGGAA
CATCGCCGTC TGGTCACGAT CGAGCAGCGC TTCTACAACA AGCTCGACCA CGGCTATGCG
ACGACGATCC ACAAGAGCCA AGGCGCGACC GTCGATCGCG TCAAGGTGCT TGCTTCCCTT
TCGCTGGACC GTCATCTCAC CTATGTGGCG ATGACGCGCC ATCGCGAGGA TCTCGCCATC
TATTACGGCC GACGTTCTTT CGCGAAGTCC GGTGGCCTTA TCCCGATCCT GTCGCGCCGG
AACGCCAAGG AGACGACGCT CGACTACGAG AAGAGCTCTT TGTACGGCCA AGCCTTGCGC
TTCGCCGAGG CGCGAGGCCT GCATCTCATG AACGTCGCCC GCACGATCGC CCACGATCGC
CTCCAATGGG TCGTACGGCA GAAACAAAAG CTCGCCGATC TCGGCGCCCG CCTGGCGGCA
ATTGGCGTGA TACTCGGGCG CGCCGCCAGC GCCAAAACAT CACCCAAATC GAAGGCCAAG
GAGTCGAAGC CCATGGTATC TGGCATTTCC ACTTTCCCGA AATCCATCGA CCAGTCCGTC
GAGGACAAGC TCGCAGCAGA TCCCGGTCTC AAAAAACAAT GGGAGGATGT CTCCACTCGC
TTCCATCTCG TCTACGCCCA GCCGGAAAGC GCCTTCAAGG CGGTGAATGT CGACGCGATG
CTCAAGGATC AGGCGATCGC CAAAACCACG CTGGCAAAGA TCGCCGGCGA ACCGGAGCGC
TTCGGTGCAT TGAGGGGTAA GACGGGCGTG TTCGCCAACC GGGGCGACAA GCAGGACCGC
GAACGGGCGA TTGCCAACGT GCCGGCTCTG GCCCGCAATC TCGAACGCTA TCTTCGCCAG
CGGGCCGAGA TCGAACGCAA GCATGAAACG GAGGAACGCG CGGTTCGCCG GCAAGTCTCG
GTCGACATCC CCGCGCTCTC TGCTCCCGCA AAGCAAACGC TCGAGCGCGT GCGTGATGCG
ATCGACCGCG ATGATCTTCC CGCCGGTCTC GAATATGCGC TTGCCGTCAA AATGGTGAAG
GCCGAACTCG ATCGGTTCGC CAAAGCCGTC TCGCAACGGT TCGGCGAACG CACCTTCCTC
GGCATCGCGT CGAAGGATCC GAGCGGAGAG ACCTTCAAGT CCGTCACGGC AGGGATGAAC
CCCGCGCAAA AGGCGGAGGT ACAAGCCGCC TGGAATTCGA TGCGGACCAT CCAGCAGCTC
TCCGCTCATG AGAGAACGAC CGAGGCGCTG AAGCAGGCCG AGACCTTGCG GCAGACCAGG
AGCCAGGGAC TTTCGCTGAA ATGA
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| Protein sequence | MAVPHFSVSI VARGSGRSAV LSAAYRHCAK MDYEREARTI DYTRKRGLLY EEFVIPAGAP
TWLRAMIADR SVSGASEAFW NKVEAFEKRS DAQLAKDVTI ALPIELSAEQ SIALVRDFVE
RHITSKGMVA DWVYHDAPGN PHVHLMTTLR PLTERGFGAK KIAVTSPDGN PMRNDAGKIV
YELWAGSADD FNTIRDGWFA CQNRHLALAG LDIRVDGRSF EKQGIELTPT IHLGVGTKAI
DRKAEQANAR SSAWSPKLER IELQEDRRTE NARRIQRRPE IVLDLITREK SVFDERDVAK
ILHRYIDDAA LFQNLMVRIL QSPEALRLER DRIDFATGIR TPAKYTTREM IRLEAEMVSR
AIWLSGRASH GVREAVLEAT FARHARLSDE QRTAIERVAG GERIAAVIGR AGAGKTTMMK
AAREAWEASG YRVVGGALAG KAAEGLEKEA GIQSRTLSSW ELRWNQSRDQ IDTRTVFVLD
EAGMVSSRQM ALFVEAVSKA GAKLVLVGDP EQLQPIEAGA AFRAIADRIG YAELKTIYRQ
RQQWMRDASL DLGRGNVGQA VDAYRAHGHV RGLDLKAQAV ESLIADWDRD YDPSKSSLIL
AHLRRDVRML NDMARAKLVE RGILADGFAF KTEDGTRMFA AGDQIVFLKN EGSLGVKNGM
LAKVIDAAAG RLVVALGEGE HRRLVTIEQR FYNKLDHGYA TTIHKSQGAT VDRVKVLASL
SLDRHLTYVA MTRHREDLAI YYGRRSFAKS GGLIPILSRR NAKETTLDYE KSSLYGQALR
FAEARGLHLM NVARTIAHDR LQWVVRQKQK LADLGARLAA IGVILGRAAS AKTSPKSKAK
ESKPMVSGIS TFPKSIDQSV EDKLAADPGL KKQWEDVSTR FHLVYAQPES AFKAVNVDAM
LKDQAIAKTT LAKIAGEPER FGALRGKTGV FANRGDKQDR ERAIANVPAL ARNLERYLRQ
RAEIERKHET EERAVRRQVS VDIPALSAPA KQTLERVRDA IDRDDLPAGL EYALAVKMVK
AELDRFAKAV SQRFGERTFL GIASKDPSGE TFKSVTAGMN PAQKAEVQAA WNSMRTIQQL
SAHERTTEAL KQAETLRQTR SQGLSLK
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