Gene Rleg_5508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5508 
Symbol 
ID8016399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp94312 
End bp95355 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content60% 
IMG OID644827675 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002978875 
Protein GI241518247 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0465771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACAA AGCAAAGCCG GATTCTGCTC TCGGCGATCA TGACAGCAAT CCTGTCCACC 
CCCCTGCGAG CAGAAACGCT TGTGGTCAAC AGCTACGGCG GCCCCTACGA GGAGATCATA
GAAAAAGCGA TCATCGAACC GTTCGAGGCC AAGTTCGGTA TCGATGTCAT TTATGATCCG
GTCGGCTCGG CCTCGCAGGA CTATGCGAAA ATCAAGGCGA CCGGGGGCCG ACCGGGGTTC
GATGTCGTCG TCATGACCGC TTCGCAGTCG GTGCAGGGCT GCCGTGACGG CGTGCTGGAG
AAACTTGACG CGGCCACGAT CCCGAACCTT GCCAAGCTCA TGCCGAGATT GGCGGCCGCG
GCCGGTCCCT GCGGTGCCGT GCACGAAGTC CAGTACCTGT CGCTCCTCTA CCGGAAGGAC
AAGCTTGCCA CGCCGTCCTC CTGGACGGCG CTCCTCGCCC CAGAGCTGAA GGGCAGGATC
GTGCTGCCGA CGTTTCAAAA CATCATGGCC ATCTACCTCG TCGAGATGAT GTCCGTGATC
AATGGTGGCG ACCTTGTCGA CAATCTCGAT CCGGGTTTCA AGGCCATGGA AGCTGTCGCC
AGGCAGTCCA TTGGATTCGA ACAATCGTCT GCCATTCTTG AAAGCTACAT CAAGGACGGC
ACGGTCTGGG CCATGCCTTT CTGGAACGGT CGCGCTCAAC TCCTCGTCGA TGCCGGCTTG
CCCGTTGACT ACATCCGTCC CAAGGAAGGC ACCATTCCTC TCATCGCCAC GCTAAACGTG
CCCGCGGGTG CACAAAACAA GCAATCGGCC ATGAAGTTCA TCGATTTCTT CCTGGAAAAG
ACAAGTCAGG AAGCGTGGAT CGGTGGCTAC AAGGTCGGGA GCGCGCGAAC CGACGTAGAG
GTCCCCGAGG CGATTCGCAC GCGGCAGATC ACCTCGGAAG CTGACCTCAA GACCCTGCTT
CTTCCGGACC TGTCGCTCGT CGCCGAGCGC CTGCCGCGCT GGGCCGAGCA GTGGGACCGC
GATGTCGTTC CCCAGGCAGA CTGA
 
Protein sequence
MGTKQSRILL SAIMTAILST PLRAETLVVN SYGGPYEEII EKAIIEPFEA KFGIDVIYDP 
VGSASQDYAK IKATGGRPGF DVVVMTASQS VQGCRDGVLE KLDAATIPNL AKLMPRLAAA
AGPCGAVHEV QYLSLLYRKD KLATPSSWTA LLAPELKGRI VLPTFQNIMA IYLVEMMSVI
NGGDLVDNLD PGFKAMEAVA RQSIGFEQSS AILESYIKDG TVWAMPFWNG RAQLLVDAGL
PVDYIRPKEG TIPLIATLNV PAGAQNKQSA MKFIDFFLEK TSQEAWIGGY KVGSARTDVE
VPEAIRTRQI TSEADLKTLL LPDLSLVAER LPRWAEQWDR DVVPQAD