Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5508 |
Symbol | |
ID | 8016399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 94312 |
End bp | 95355 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644827675 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002978875 |
Protein GI | 241518247 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0465771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACAA AGCAAAGCCG GATTCTGCTC TCGGCGATCA TGACAGCAAT CCTGTCCACC CCCCTGCGAG CAGAAACGCT TGTGGTCAAC AGCTACGGCG GCCCCTACGA GGAGATCATA GAAAAAGCGA TCATCGAACC GTTCGAGGCC AAGTTCGGTA TCGATGTCAT TTATGATCCG GTCGGCTCGG CCTCGCAGGA CTATGCGAAA ATCAAGGCGA CCGGGGGCCG ACCGGGGTTC GATGTCGTCG TCATGACCGC TTCGCAGTCG GTGCAGGGCT GCCGTGACGG CGTGCTGGAG AAACTTGACG CGGCCACGAT CCCGAACCTT GCCAAGCTCA TGCCGAGATT GGCGGCCGCG GCCGGTCCCT GCGGTGCCGT GCACGAAGTC CAGTACCTGT CGCTCCTCTA CCGGAAGGAC AAGCTTGCCA CGCCGTCCTC CTGGACGGCG CTCCTCGCCC CAGAGCTGAA GGGCAGGATC GTGCTGCCGA CGTTTCAAAA CATCATGGCC ATCTACCTCG TCGAGATGAT GTCCGTGATC AATGGTGGCG ACCTTGTCGA CAATCTCGAT CCGGGTTTCA AGGCCATGGA AGCTGTCGCC AGGCAGTCCA TTGGATTCGA ACAATCGTCT GCCATTCTTG AAAGCTACAT CAAGGACGGC ACGGTCTGGG CCATGCCTTT CTGGAACGGT CGCGCTCAAC TCCTCGTCGA TGCCGGCTTG CCCGTTGACT ACATCCGTCC CAAGGAAGGC ACCATTCCTC TCATCGCCAC GCTAAACGTG CCCGCGGGTG CACAAAACAA GCAATCGGCC ATGAAGTTCA TCGATTTCTT CCTGGAAAAG ACAAGTCAGG AAGCGTGGAT CGGTGGCTAC AAGGTCGGGA GCGCGCGAAC CGACGTAGAG GTCCCCGAGG CGATTCGCAC GCGGCAGATC ACCTCGGAAG CTGACCTCAA GACCCTGCTT CTTCCGGACC TGTCGCTCGT CGCCGAGCGC CTGCCGCGCT GGGCCGAGCA GTGGGACCGC GATGTCGTTC CCCAGGCAGA CTGA
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Protein sequence | MGTKQSRILL SAIMTAILST PLRAETLVVN SYGGPYEEII EKAIIEPFEA KFGIDVIYDP VGSASQDYAK IKATGGRPGF DVVVMTASQS VQGCRDGVLE KLDAATIPNL AKLMPRLAAA AGPCGAVHEV QYLSLLYRKD KLATPSSWTA LLAPELKGRI VLPTFQNIMA IYLVEMMSVI NGGDLVDNLD PGFKAMEAVA RQSIGFEQSS AILESYIKDG TVWAMPFWNG RAQLLVDAGL PVDYIRPKEG TIPLIATLNV PAGAQNKQSA MKFIDFFLEK TSQEAWIGGY KVGSARTDVE VPEAIRTRQI TSEADLKTLL LPDLSLVAER LPRWAEQWDR DVVPQAD
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