| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5489 |
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| Symbol | |
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| ID | 8016798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012853 |
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| Strand | + |
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| Start bp | 74676 |
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| End bp | 75338 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644827657 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_002978857 |
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| Protein GI | 241518229 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.229718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATGC AACGCGCCCC TGAGAACCCA TATCTCGCCG CCAGGCAGGA ATGGAACGAA
CGATATGGTT CCTATGTCAG GGCGGCGGCG GCCTGGCGCG TTGTCGGCAT GATCGCACTG
GCAATGGCCG TGATCGGCTT CGTCTATGCG CTCTATTTGA GCACGCAGGT CAAACTCGTC
CCCTATATCG TCGAGGTCGA CAAGCTTGGG ACCTCGGTCA GCGCGGGTTT TCCTCAGCAG
ATCGAATATG CCGACCCGCG GGTGGTTCGC GCCACGCTCG GTGGCTTCGT CACGAGCTTC
CGGTCGGTGA CGCCAGACGC CGTCGTTCAA AAGCAATACA TCGATCGGAC GTATGCGCTG
CTTCGGACAT CCGATCCGTC GACCGAGAAA ATCAACGCCT GGTTCCGCGG CAATTCGCCG
TTCGAGAAAG CCAAGAACGC GACAGTTGCG ATCGAAGTCA GCAACATCGT CGCCCTCTCC
AACCAGTCCT ACCAGATCGA CTGGACGGAG TTCGAGCGCG ATCGGAAGGG AAAGGAAACC
GGAACACGCC GATACCGCGG GATTGCGACC GTTACGCTGA CGGCACCACA GGACGAGGGC
GTGATCAGGC TTAATCCGAT CGGTCTTTAT CTGAAAGACT TCGAGTGGAC CGCGCAGCTT
TGA
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| Protein sequence | MAMQRAPENP YLAARQEWNE RYGSYVRAAA AWRVVGMIAL AMAVIGFVYA LYLSTQVKLV
PYIVEVDKLG TSVSAGFPQQ IEYADPRVVR ATLGGFVTSF RSVTPDAVVQ KQYIDRTYAL
LRTSDPSTEK INAWFRGNSP FEKAKNATVA IEVSNIVALS NQSYQIDWTE FERDRKGKET
GTRRYRGIAT VTLTAPQDEG VIRLNPIGLY LKDFEWTAQL
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