| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5481 |
|---|
| Symbol | |
|---|
| ID | 8016790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012853 |
|---|
| Strand | + |
|---|
| Start bp | 67795 |
|---|
| End bp | 68421 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644827649 |
|---|
| Product | putative autoinducer synthesis protein |
|---|
| Protein accession | YP_002978849 |
|---|
| Protein GI | 241518221 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGA TAGCACTCAA GACGACAAAA TCGCGCAAGG ACGCAGCACT TCTCGATCAA
ATGTACCGGC TGCGGTCGCG TGTTTTCGCC GACCGTCTCG CCTGGAACGT GTCCAGGTCC
AACGGGCGGG AGCGCGATCA ATTCGACGAA TTCGGGCCGA CCTATATTCT TGCCCTATCG
GATGGCGATG TGGTGATCGG CTGCGCACGG CTGCTGCCGG CCATCGGTCC TACCATGCTG
CAGCAGGTCT TCCCGCAGCT TCTTTCGGCA GGACGGCTCG ACGCCGATCC GGCCATGATC
GAAAGCTCTC GTTTTTGCGT CGATACCGCG GGTTCCCGTG GGGCCGGGGA AGGGGGCCTG
AGCGACGTCA CGTTCGGCAT GTTCGCAGGC ATCCTCGAAT GGTGCCTCCA TCACGGTTAC
CGCGAAATCG CAACAGCCAC CGATGTTCGC TTCGAGCGAA TCTTGCGGCG CGCCGGCTGG
CCGATGCAGC GCCTTGGTCA GCCGATCATG ATCAACGAGA CGCTGAGCGT GGCCGGCATC
CTGCCGGTCA AGTGGGAGAA CTTCGAACGG GTCCGACCGC ACGCCTACCG CTCCGCATTC
GGTGCGCGGC GCCAGCATGC GGCATAA
|
|---|
| Protein sequence | MKLIALKTTK SRKDAALLDQ MYRLRSRVFA DRLAWNVSRS NGRERDQFDE FGPTYILALS
DGDVVIGCAR LLPAIGPTML QQVFPQLLSA GRLDADPAMI ESSRFCVDTA GSRGAGEGGL
SDVTFGMFAG ILEWCLHHGY REIATATDVR FERILRRAGW PMQRLGQPIM INETLSVAGI
LPVKWENFER VRPHAYRSAF GARRQHAA
|
|---|
| |